Mercurial > repos > iuc > multiqc
comparison test-data/quast_stats.tabular @ 6:01237d721a9f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit d9175b08720c657b7a4521472450dd5ac6fd9361
| author | iuc |
|---|---|
| date | Sat, 23 Dec 2017 15:57:55 -0500 |
| parents | 3bad335ccea9 |
| children | e0f4a651c6b9 |
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| 5:5746cb5cf08d | 6:01237d721a9f |
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| 1 Sample L50 Duplication ratio GC (%) LG75 # misassemblies # contigs (>= 25000 bp) L75 Total length (>= 10000 bp) # genes # mismatches per 100 kbp # indels per 100 kbp # contigs (>= 5000 bp) Unaligned length Total length # unaligned contigs # local misassemblies Reference GC (%) # N's per 100 kbp Total length (>= 25000 bp) # contigs (>= 0 bp) # genes_partial NGA50 NGA75 Largest contig # contigs # unaligned contigs_partial NG75 # contigs (>= 50000 bp) Total length (>= 0 bp) NG50 # contigs (>= 10000 bp) LGA50 NA75 Total length (>= 5000 bp) Genome fraction (%) LGA75 LG50 N75 Total length (>= 1000 bp) NA50 # contigs (>= 1000 bp) N50 Total length (>= 50000 bp) Largest alignment LA75 LA50 Misassembled contigs length Reference length # misassembled contigs | 1 Sample # mismatches per 100 kbp # misassembled contigs Largest contig # indels per 100 kbp LG75 # local misassemblies Total length (>= 25000 bp) Total length N50 NGA50 Reference GC (%) # contigs (>= 10000 bp) LA75 NG50 # genes_partial # unaligned contigs Total length (>= 50000 bp) LA50 # contigs (>= 25000 bp) NA75 GC (%) LG50 NA50 LGA75 # contigs (>= 0 bp) Largest alignment Total length (>= 0 bp) # genes # misassemblies NGA75 Total length (>= 10000 bp) # contigs (>= 5000 bp) L75 Total length (>= 1000 bp) # unaligned contigs_partial # contigs (>= 50000 bp) Total length (>= 5000 bp) N75 # contigs (>= 1000 bp) LGA50 Duplication ratio Genome fraction (%) NG75 Unaligned length # N's per 100 kbp Misassembled contigs length Reference length L50 # contigs |
| 2 14892_1#15 48.0 1.016 48.17 106.0 107.0 181.0 100.0 17893099.0 7280.0 262.21 33.75 242.0 88446.0 18435361.0 8.0 132.0 48.21 929.55 17353907.0 545.0 968.0 99244.0 51757.0 435484.0 467.0 59.0 56990.0 123.0 18465341.0 112874.0 215.0 59.0 54365.0 18079934.0 95.482 124.0 50.0 62262.0 18373173.0 102129.0 376.0 115136.0 15112131.0 356982.0 117.0 56.0 4540800.0 18916112.0 82.0 | 2 14892_1#15 262.21 82.0 435484.0 33.75 106.0 132.0 17353907.0 18435361.0 115136.0 99244.0 48.21 215.0 117.0 112874.0 968.0 8.0 15112131.0 56.0 181.0 54365.0 48.17 50.0 102129.0 124.0 545.0 356982.0 18465341.0 7280.0 107.0 51757.0 17893099.0 242.0 100.0 18373173.0 59.0 123.0 18079934.0 62262.0 376.0 59.0 1.016 95.482 56990.0 88446.0 929.55 4540800.0 18916112.0 48.0 467.0 |