Mercurial > repos > iuc > multiqc
comparison test-data/samtools_stats_stats.tabular @ 6:01237d721a9f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit d9175b08720c657b7a4521472450dd5ac6fd9361
| author | iuc |
|---|---|
| date | Sat, 23 Dec 2017 15:57:55 -0500 |
| parents | 3bad335ccea9 |
| children | e0f4a651c6b9 |
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| 5:5746cb5cf08d | 6:01237d721a9f |
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| 1 Sample bases_trimmed error_rate insert_size_standard_deviation non-primary_alignments maximum_length reads_MQ0_percent reads_mapped_and_paired sequences average_quality insert_size_average reads_mapped reads_unmapped reads_QC_failed reads_duplicated_percent reads_paired 1st_fragments reads_MQ0 average_length reads_mapped_and_paired_percent bases_mapped total_length bases_mapped_(cigar) bases_duplicated pairs_with_other_orientation mismatches reads_properly_paired inward_oriented_pairs filtered_sequences outward_oriented_pairs reads_unmapped_percent reads_QC_failed_percent reads_properly_paired_percent reads_paired_percent reads_mapped_percent raw_total_sequences pairs_on_different_chromosomes last_fragments is_sorted reads_duplicated | 1 Sample insert_size_average reads_mapped_and_paired reads_QC_failed_percent outward_oriented_pairs 1st_fragments bases_duplicated reads_MQ0 bases_mapped maximum_length bases_trimmed reads_duplicated inward_oriented_pairs sequences error_rate insert_size_standard_deviation non-primary_alignments reads_unmapped_percent mismatches reads_mapped_and_paired_percent reads_mapped_percent raw_total_sequences reads_mapped pairs_on_different_chromosomes reads_MQ0_percent pairs_with_other_orientation reads_paired_percent total_length reads_unmapped average_length reads_duplicated_percent bases_mapped_(cigar) average_quality reads_properly_paired reads_properly_paired_percent reads_QC_failed last_fragments filtered_sequences reads_paired is_sorted |
| 2 samtools_stats 0.0 0.004248509 1223.0 12111.0 101.0 0.0109064676911 638746.0 641821.0 26.0 719.7 641821.0 0.0 0.0 0.0 641821.0 320981.0 70.0 101.0 99.520894455 64823921.0 64823921.0 64823921.0 0.0 30.0 275405.0 635626.0 317512.0 0.0 1294.0 0.0 0.0 99.0347776093 100.0 100.0 641821.0 0.0 320840.0 1.0 0.0 | 2 samtools_stats 719.7 638746.0 0.0 1294.0 320981.0 0.0 70.0 64823921.0 101.0 0.0 0.0 317512.0 641821.0 0.004248509 1223.0 12111.0 0.0 275405.0 99.52089445499603 100.0 641821.0 641821.0 0.0 0.010906467691147531 30.0 100.0 64823921.0 0.0 101.0 0.0 64823921.0 26.0 635626.0 99.03477760933345 0.0 320840.0 0.0 641821.0 1.0 |