Mercurial > repos > iuc > multiqc

comparison test-data/aligner_soft_stats.tabular @ 9:df99138d2776 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 31d721c19f5681dfe542dd23185c06c8f29f1945
author iuc
date Wed, 25 Apr 2018 07:59:52 -0400
parents e0f4a651c6b9
children f0ec41881020
comparison
equal deleted inserted replaced
8:e0f4a651c6b9 9:df99138d2776
1 Sample Cutadapt_mqc-generalstats-percent_trimmed Kallisto_mqc-generalstats-pseudoaligned_reads Kallisto_mqc-generalstats-fragment_length Kallisto_mqc-generalstats-percent_aligned Bismark_mqc-generalstats-aligned_reads Bismark_mqc-generalstats-percent_aligned Bowtie 2_mqc-generalstats-overall_alignment_rate HiCExplorer_mqc-generalstats-Mapped HiCExplorer_mqc-generalstats-Pairs_used HiCExplorer_mqc-generalstats-Min_rest_site_distance HiCExplorer_mqc-generalstats-Pairs_considered HiCExplorer_mqc-generalstats-Max_rest_site_distance HISAT2_mqc-generalstats-overall_alignment_rate STAR_mqc-generalstats-uniquely_mapped_percent STAR_mqc-generalstats-uniquely_mapped Tophat_mqc-generalstats-overall_aligned_percent Tophat_mqc-generalstats-aligned_not_multimapped_discordant 1 Sample Cutadapt_mqc-generalstats-percent_trimmed Kallisto_mqc-generalstats-percent_aligned Kallisto_mqc-generalstats-fragment_length Kallisto_mqc-generalstats-pseudoaligned_reads Bismark_mqc-generalstats-percent_aligned Bismark_mqc-generalstats-aligned_reads Bowtie 2_mqc-generalstats-overall_alignment_rate HiCExplorer_mqc-generalstats-Pairs_used HiCExplorer_mqc-generalstats-Min_rest_site_distance HiCExplorer_mqc-generalstats-Mapped HiCExplorer_mqc-generalstats-Max_rest_site_distance HiCExplorer_mqc-generalstats-Pairs_considered HISAT2_mqc-generalstats-overall_alignment_rate STAR_mqc-generalstats-uniquely_mapped STAR_mqc-generalstats-uniquely_mapped_percent Tophat_mqc-generalstats-aligned_not_multimapped_discordant Tophat_mqc-generalstats-overall_aligned_percent
2 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165 2 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165
3 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 48531088.0 167.866 83.65114569077758 3 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 83.65114569077758 167.866 48531088.0
4 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073 4 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073
5 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1 7.7267901650356645 5 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1 7.7267901650356645
6 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1 59280920.0 169.418 84.50278473550448 6 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1 84.50278473550448 169.418 59280920.0
7 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2 32.18485266309055 7 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2 32.18485266309055
8 bismark_SE_report 220558.0 69.71079996207212 8 bismark_SE_report 69.71079996207212 220558.0
9 bowtie2_1 98.33 9 bowtie2_1 98.33
10 bowtie2_2 98.31 10 bowtie2_2 98.31
11 hicexplorer_hicexplorer1_small_test 0.08778492343698428 0.3732734564876029 303.0 99983.0 800.0 11 hicexplorer_hicexplorer1_1_small_test 0.3732734564876029 303.0 0.08778492343698428 800.0 99983.0
12 hicexplorer_hicexplorer2_small_test_rf 0.08778492343698428 0.35940109818669175 152.0 99983.0 1500.0 12 hicexplorer_hicexplorer1_small_test 0.3732734564876029 303.0 0.08778492343698428 800.0 99983.0
13 hicexplorer_hicexplorer2_small_test_rf 0.35940109818669175 152.0 0.08778492343698428 1500.0 99983.0
13 hisat2_1 96.15 14 hisat2_1 96.15
14 hisat2_2 96.15 15 hisat2_2 96.15
15 star_log 89.0 89.0 16 star_log 89.0 89.0
16 tophat_align 99.5 307733.0 17 tophat_align 307733.0 99.5