diff test-data/cutadapt.txt @ 0:3bad335ccea9 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cutadapt.txt	Tue Oct 24 06:29:59 2017 -0400
@@ -0,0 +1,129 @@
+You are running cutadapt 1.6 with Python 2.7.3
+Command line parameters: --format=fastq --anywhere=fakadaptater=CACG --error-rate=0.1 --times=1 --overlap=3 --output=/omaha-beach/cloud_26/files/000/dataset_82.dat /omaha-beach/cloud_26/files/000/dataset_33.dat
+Maximum error rate: 10.00%
+   No. of adapters: 1
+   Processed reads:       316390
+   Processed bases:     31955390 bp (32.0 Mbp)
+     Trimmed reads:        68795 (21.7%)
+     Trimmed bases:      3443775 bp (3.4 Mbp) (10.78% of total)
+   Too short reads:            0 (0.0% of processed reads)
+    Too long reads:            0 (0.0% of processed reads)
+        Total time:      5.28 s
+     Time per read:      0.017 ms
+
+=== Adapter 'fakadaptater' ===
+
+Sequence: CACG; Length: 4; Trimmed: 68795 times.
+2162 times, it overlapped the 5' end of a read
+66633 times, it overlapped the 3' end or was within the read
+
+No. of allowed errors:
+0-4 bp: 0
+
+Overview of removed sequences (5')
+length	count	expect	max.err	error counts
+3	357	4943.6	0	357
+4	1805	1235.9	0	1805
+
+
+Overview of removed sequences (3' or within)
+length	count	expect	max.err	error counts
+3	4175	4943.6	0	4175
+4	520	1235.9	0	520
+5	442	1235.9	0	442
+6	522	1235.9	0	522
+7	538	1235.9	0	538
+8	526	1235.9	0	526
+9	482	1235.9	0	482
+10	547	1235.9	0	547
+11	502	1235.9	0	502
+12	539	1235.9	0	539
+13	571	1235.9	0	571
+14	601	1235.9	0	601
+15	537	1235.9	0	537
+16	592	1235.9	0	592
+17	604	1235.9	0	604
+18	617	1235.9	0	617
+19	594	1235.9	0	594
+20	493	1235.9	0	493
+21	558	1235.9	0	558
+22	503	1235.9	0	503
+23	573	1235.9	0	573
+24	609	1235.9	0	609
+25	653	1235.9	0	653
+26	625	1235.9	0	625
+27	541	1235.9	0	541
+28	501	1235.9	0	501
+29	618	1235.9	0	618
+30	539	1235.9	0	539
+31	614	1235.9	0	614
+32	594	1235.9	0	594
+33	627	1235.9	0	627
+34	572	1235.9	0	572
+35	690	1235.9	0	690
+36	615	1235.9	0	615
+37	654	1235.9	0	654
+38	681	1235.9	0	681
+39	530	1235.9	0	530
+40	731	1235.9	0	731
+41	622	1235.9	0	622
+42	611	1235.9	0	611
+43	722	1235.9	0	722
+44	664	1235.9	0	664
+45	659	1235.9	0	659
+46	651	1235.9	0	651
+47	591	1235.9	0	591
+48	642	1235.9	0	642
+49	545	1235.9	0	545
+50	573	1235.9	0	573
+51	591	1235.9	0	591
+52	567	1235.9	0	567
+53	749	1235.9	0	749
+54	647	1235.9	0	647
+55	753	1235.9	0	753
+56	696	1235.9	0	696
+57	780	1235.9	0	780
+58	607	1235.9	0	607
+59	758	1235.9	0	758
+60	643	1235.9	0	643
+61	578	1235.9	0	578
+62	670	1235.9	0	670
+63	652	1235.9	0	652
+64	816	1235.9	0	816
+65	732	1235.9	0	732
+66	640	1235.9	0	640
+67	644	1235.9	0	644
+68	818	1235.9	0	818
+69	658	1235.9	0	658
+70	587	1235.9	0	587
+71	672	1235.9	0	672
+72	588	1235.9	0	588
+73	645	1235.9	0	645
+74	668	1235.9	0	668
+75	725	1235.9	0	725
+76	651	1235.9	0	651
+77	701	1235.9	0	701
+78	662	1235.9	0	662
+79	655	1235.9	0	655
+80	760	1235.9	0	760
+81	746	1235.9	0	746
+82	705	1235.9	0	705
+83	704	1235.9	0	704
+84	726	1235.9	0	726
+85	692	1235.9	0	692
+86	700	1235.9	0	700
+87	758	1235.9	0	758
+88	640	1235.9	0	640
+89	665	1235.9	0	665
+90	848	1235.9	0	848
+91	693	1235.9	0	693
+92	775	1235.9	0	775
+93	1237	1235.9	0	1237
+94	629	1235.9	0	629
+95	574	1235.9	0	574
+96	525	1235.9	0	525
+97	586	1235.9	0	586
+98	696	1235.9	0	696
+99	860	1235.9	0	860
+100	851	1235.9	0	851
+