Mercurial > repos > iuc > multiqc

diff test-data/aligner_soft_stats.tabular @ 8:e0f4a651c6b9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 13875b17a3a5259b9705529a3597bea12828cb20
author iuc
date Fri, 20 Apr 2018 01:06:25 -0400
parents 01237d721a9f
children df99138d2776
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--- a/test-data/aligner_soft_stats.tabular	Sun Jan 14 09:55:46 2018 -0500
+++ b/test-data/aligner_soft_stats.tabular	Fri Apr 20 01:06:25 2018 -0400
@@ -1,16 +1,16 @@
-Sample	Cutadapt_percent_trimmed-1	Kallisto_percent_aligned-1-1	Kallisto_pseudoaligned_reads-1	Kallisto_fragment_length-1	Bismark_aligned_reads-1	Bismark_percent_aligned-2	Bowtie 2_overall_alignment_rate-1-1	HiCExplorer_Pairs_considered-1	HiCExplorer_Min_rest_site_distance-1	HiCExplorer_Mapped-1	HiCExplorer_Max_rest_site_distance-1	HiCExplorer_Pairs_used-1	HISAT2_overall_alignment_rate-2	STAR_uniquely_mapped_percent-1	STAR_uniquely_mapped-1	Tophat_overall_aligned_percent-1	Tophat_aligned_not_multimapped_discordant-1
+Sample	Cutadapt_mqc-generalstats-percent_trimmed	Kallisto_mqc-generalstats-pseudoaligned_reads	Kallisto_mqc-generalstats-fragment_length	Kallisto_mqc-generalstats-percent_aligned	Bismark_mqc-generalstats-aligned_reads	Bismark_mqc-generalstats-percent_aligned	Bowtie 2_mqc-generalstats-overall_alignment_rate	HiCExplorer_mqc-generalstats-Mapped	HiCExplorer_mqc-generalstats-Pairs_used	HiCExplorer_mqc-generalstats-Min_rest_site_distance	HiCExplorer_mqc-generalstats-Pairs_considered	HiCExplorer_mqc-generalstats-Max_rest_site_distance	HISAT2_mqc-generalstats-overall_alignment_rate	STAR_mqc-generalstats-uniquely_mapped_percent	STAR_mqc-generalstats-uniquely_mapped	Tophat_mqc-generalstats-overall_aligned_percent	Tophat_mqc-generalstats-aligned_not_multimapped_discordant
 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1	5.880883098970165																
-HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1		83.65114569077758	48531088.0	167.866													
+HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1		48531088.0	167.866	83.65114569077758													
 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2	31.038195169381073																
 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1	7.7267901650356645																
-HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1		84.50278473550448	59280920.0	169.418													
+HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1		59280920.0	169.418	84.50278473550448													
 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2	32.18485266309055																
-align_0					220558.0	69.71079996207212											
+bismark_SE_report					220558.0	69.71079996207212											
 bowtie2_1							98.33										
 bowtie2_2							98.31										
-hicexplorer_3_small_test								99983.0	303.0	0.08778492343698428	800.0	0.3732734564876029					
-hicexplorer_3_small_test_rf								99983.0	152.0	0.08778492343698428	1500.0	0.35940109818669175					
+hicexplorer_hicexplorer1_small_test								0.08778492343698428	0.3732734564876029	303.0	99983.0	800.0					
+hicexplorer_hicexplorer2_small_test_rf								0.08778492343698428	0.35940109818669175	152.0	99983.0	1500.0					
 hisat2_1													96.15				
 hisat2_2													96.15				
 star_log														89.0	89.0		
-tophat																99.5	307733.0
+tophat_align																99.5	307733.0