Mercurial > repos > iuc > mummer_delta_filter
diff test-data/report.txt @ 4:e8fdceffea4c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mummer4 commit 026db7297e987c1b7ce7f5dd4f8746d1bd435538
| author | iuc |
|---|---|
| date | Mon, 18 Mar 2024 12:41:50 +0000 |
| parents | fbca557a4847 |
| children |
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--- a/test-data/report.txt Sat Nov 27 09:58:32 2021 +0000 +++ b/test-data/report.txt Mon Mar 18 12:41:50 2024 +0000 @@ -1,4 +1,4 @@ -/tmp/tmpm1aw7z9b/files/6/1/9/dataset_619c747c-cdb5-4d85-adda-e0ec5f7fa2fe.dat /tmp/tmpm1aw7z9b/files/f/e/c/dataset_fec4ecfe-55bb-4ff9-86e1-292952d00dd1.dat +/tmp/tmpmprg208i/files/f/1/b/dataset_f1b7734e-9d42-4c7c-9775-5f18da934854.dat /tmp/tmpmprg208i/files/6/f/5/dataset_6f561e62-f409-4d5b-9469-6080685d3666.dat NUCMER [REF] [QRY] @@ -39,49 +39,49 @@ [SNPs] TotalSNPs 78 78 +AT 2(2.5641%) 2(2.5641%) +AC 6(7.6923%) 5(6.4103%) +AG 2(2.5641%) 5(6.4103%) +TA 2(2.5641%) 2(2.5641%) TG 2(2.5641%) 5(6.4103%) TC 9(11.5385%) 28(35.8974%) -TA 2(2.5641%) 2(2.5641%) -GC 6(7.6923%) 6(7.6923%) -GA 5(6.4103%) 2(2.5641%) -GT 5(6.4103%) 2(2.5641%) CT 28(35.8974%) 9(11.5385%) CA 5(6.4103%) 6(7.6923%) CG 6(7.6923%) 6(7.6923%) -AT 2(2.5641%) 2(2.5641%) -AG 2(2.5641%) 5(6.4103%) -AC 6(7.6923%) 5(6.4103%) +GT 5(6.4103%) 2(2.5641%) +GA 5(6.4103%) 2(2.5641%) +GC 6(7.6923%) 6(7.6923%) TotalGSNPs 1 1 -TA 0(0.0000%) 0(0.0000%) +GT 0(0.0000%) 0(0.0000%) +GA 0(0.0000%) 0(0.0000%) +GC 0(0.0000%) 0(0.0000%) +CG 0(0.0000%) 0(0.0000%) +CT 0(0.0000%) 0(0.0000%) +CA 0(0.0000%) 1(100.0000%) +TC 0(0.0000%) 0(0.0000%) TG 0(0.0000%) 0(0.0000%) -TC 0(0.0000%) 0(0.0000%) +TA 0(0.0000%) 0(0.0000%) +AT 0(0.0000%) 0(0.0000%) AG 0(0.0000%) 0(0.0000%) AC 1(100.0000%) 0(0.0000%) -AT 0(0.0000%) 0(0.0000%) -GC 0(0.0000%) 0(0.0000%) -GA 0(0.0000%) 0(0.0000%) -GT 0(0.0000%) 0(0.0000%) -CT 0(0.0000%) 0(0.0000%) -CG 0(0.0000%) 0(0.0000%) -CA 0(0.0000%) 1(100.0000%) TotalIndels 13 13 +A. 3(23.0769%) 0(0.0000%) T. 0(0.0000%) 2(15.3846%) -G. 2(15.3846%) 1(7.6923%) C. 5(38.4615%) 0(0.0000%) -A. 3(23.0769%) 0(0.0000%) -.G 1(7.6923%) 2(15.3846%) -.C 0(0.0000%) 5(38.4615%) +G. 2(15.3846%) 1(7.6923%) .A 0(0.0000%) 3(23.0769%) .T 2(15.3846%) 0(0.0000%) +.C 0(0.0000%) 5(38.4615%) +.G 1(7.6923%) 2(15.3846%) TotalGIndels 0 0 +G. 0(0.0000%) 0(0.0000%) +C. 0(0.0000%) 0(0.0000%) T. 0(0.0000%) 0(0.0000%) A. 0(0.0000%) 0(0.0000%) -G. 0(0.0000%) 0(0.0000%) -C. 0(0.0000%) 0(0.0000%) -.A 0(0.0000%) 0(0.0000%) .C 0(0.0000%) 0(0.0000%) .G 0(0.0000%) 0(0.0000%) +.A 0(0.0000%) 0(0.0000%) .T 0(0.0000%) 0(0.0000%)