diff test-data/report.txt @ 0:26f2cc1cc1e9 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mummer4 commit 8133565adbfc012fa54b96449c2a18d044049107
author iuc
date Wed, 05 Dec 2018 02:38:48 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/report.txt	Wed Dec 05 02:38:48 2018 -0500
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+                               [REF]                [QRY]
+.A                          0(0.00%)             0(0.00%)
+.A                          0(0.00%)            3(23.08%)
+.C                          0(0.00%)             0(0.00%)
+.C                          0(0.00%)            5(38.46%)
+.G                          0(0.00%)             0(0.00%)
+.G                          1(7.69%)            2(15.38%)
+.T                          0(0.00%)             0(0.00%)
+.T                         2(15.38%)             0(0.00%)
+/Users/nickeener/GalaxyProjects/tools-iuc/tools/mummer4/test-data/human_aqp3.fasta /Users/nickeener/GalaxyProjects/tools-iuc/tools/mummer4/test-data/mouse_aqp3.fasta
+1-to-1                             2                    2
+A.                          0(0.00%)             0(0.00%)
+A.                         3(23.08%)             0(0.00%)
+AC                          6(7.69%)             5(6.41%)
+AC                        1(100.00%)             0(0.00%)
+AG                          0(0.00%)             0(0.00%)
+AG                          2(2.56%)             5(6.41%)
+AT                          0(0.00%)             0(0.00%)
+AT                          2(2.56%)             2(2.56%)
+AlignedBases             670(10.34%)          663(12.14%)
+AlignedSeqs               1(100.00%)           1(100.00%)
+AvgIdentity                    86.48                86.48
+AvgIdentity                    86.48                86.48
+AvgLength                     335.00               331.50
+AvgLength                     335.00               331.50
+Breakpoints                        4                    4
+C.                          0(0.00%)             0(0.00%)
+C.                         5(38.46%)             0(0.00%)
+CA                          0(0.00%)           1(100.00%)
+CA                          5(6.41%)             6(7.69%)
+CG                          0(0.00%)             0(0.00%)
+CG                          6(7.69%)             6(7.69%)
+CT                          0(0.00%)             0(0.00%)
+CT                        28(35.90%)            9(11.54%)
+G.                          0(0.00%)             0(0.00%)
+G.                         2(15.38%)             1(7.69%)
+GA                          0(0.00%)             0(0.00%)
+GA                          5(6.41%)             2(2.56%)
+GC                          0(0.00%)             0(0.00%)
+GC                          6(7.69%)             6(7.69%)
+GT                          0(0.00%)             0(0.00%)
+GT                          5(6.41%)             2(2.56%)
+InsertionAvg                 1936.67              1599.00
+InsertionSum                    5810                 4797
+Insertions                         3                    3
+Inversions                         0                    0
+M-to-M                             2                    2
+NUCMER
+Relocations                        0                    0
+T.                          0(0.00%)             0(0.00%)
+T.                          0(0.00%)            2(15.38%)
+TA                          0(0.00%)             0(0.00%)
+TA                          2(2.56%)             2(2.56%)
+TC                          0(0.00%)             0(0.00%)
+TC                         9(11.54%)           28(35.90%)
+TG                          0(0.00%)             0(0.00%)
+TG                          2(2.56%)             5(6.41%)
+TandemIns                          0                    0
+TandemInsAvg                    0.00                 0.00
+TandemInsSum                       0                    0
+TotalBases                      6480                 5460
+TotalGIndels                       0                    0
+TotalGSNPs                         1                    1
+TotalIndels                       13                   13
+TotalLength                      670                  663
+TotalLength                      670                  663
+TotalSNPs                         78                   78
+TotalSeqs                          1                    1
+Translocations                     0                    0
+UnalignedBases          5810(89.66%)         4797(87.86%)
+UnalignedSeqs               0(0.00%)             0(0.00%)
+[Alignments]
+[Bases]
+[Feature Estimates]
+[SNPs]
+[Sequences]