view macros.xml @ 2:25abc2c72ff9 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanocompore commit a57b5b935a80db12a0ed867b4219453a2854dd32"

<?xml version="1.0"?>
<macros>
    <token name="@TOOL_VERSION@">1.0.0rc3.post2</token>
    <token name="@DESCRIPTION@"></token>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@TOOL_VERSION@">nanocompore</requirement>
            <requirement type="package" version="1.32">tar</requirement>
        </requirements>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="bibtex">@online{Nanocompore,
              author = {Adrien Leger, Tommaso Leonard},
              title = {Nanocompore},
              year = 2019,
              url = {https://nanocompore.rna.rocks/},
              urldate = {2020-04-30}
            }</citation>
        </citations>
    </xml>
    <token name="@WID@"><![CDATA[
Nanocompore identifies differences in ONT nanopore sequencing raw signal corresponding to RNA modifications by comparing 2 samples

Nanocompore compares 2 ONT nanopore direct RNA sequencing datasets from different experimental conditions expected to have a significant impact on RNA modifications. It is recommended to have at least 2 replicates per condition. For example one can use a control condition with a significantly reduced number of modifications such as a cell line for which a modification writing enzyme was knocked-down or knocked-out. Alternatively, on a smaller scale transcripts of interests could be synthesized in-vitro.
    ]]></token>

    <token name="@REFERENCES@"><![CDATA[
More information are available on the `project website <https://nanocompore.rna.rocks/>`_ and `github <https://github.com/tleonardi/nanocompore>`_.
    ]]></token>
</macros>