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view test-data/NanoStats.txt @ 1:4c172a4a4c9e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/nanoplot/ commit 16878097949f0af33d825e62b20b789a7f8ad319
author iuc
date Tue, 23 Oct 2018 08:30:58 -0400
parents db1eeffba23e
children acd337269171
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General summary:	 
Active channels:	169
Mean read length:	23212.6
Mean read quality:	10.1
Median read length:	9390.0
Median read quality:	10.3
Number of reads:	371
Read length N50:	60395
Total bases:	8611871
Number, percentage and megabases of reads above quality cutoffs
>Q5:	371 (100.0%) 8.6Mb
>Q7:	371 (100.0%) 8.6Mb
>Q10:	207 (55.8%) 4.7Mb
>Q12:	49 (13.2%) 0.9Mb
>Q15:	0 (0.0%) 0.0Mb
Top 5 highest mean basecall quality scores and their read lengths
1:	13.3 (6333)
2:	13.1 (5448)
3:	12.9 (27834)
4:	12.8 (20351)
5:	12.8 (97730)
Top 5 longest reads and their mean basecall quality score
1:	393431 (10.6)
2:	341725 (11.8)
3:	320662 (8.0)
4:	226843 (9.1)
5:	221901 (10.0)