comparison datasets_genome.xml @ 13:1e188c9610c3 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_datasets commit d3fa7b70aa028f527a1dbbb210c172c637dfd4d9

12:d78faac2c6ef

<tool id="datasets_download_genome" name="NCBI Datasets Genomes" profile="@PROFILE@" license="@LICENSE@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
    <description>download genome sequence, annotation and metadata</description>
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"></expand>
    <expand macro="version_command"/>
    <command><![CDATA[
#import re
@SETUP_CERTIFICATES@

Thereby its possible to inspect the metadata prior to the actual data download. Also this
allows to use the tool for querying data sets (and their accessions) of interest which
can then be downloaded in a second call using the accessions.
]]>
    </help>

</tool>

13:1e188c9610c3

<tool id="datasets_download_genome" name="NCBI Datasets Genomes" profile="@PROFILE@" license="@LICENSE@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
    <description>download genome sequence, annotation and metadata</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"></expand>
    <expand macro="version_command"/>
    <command><![CDATA[
#import re
@SETUP_CERTIFICATES@

Thereby its possible to inspect the metadata prior to the actual data download. Also this
allows to use the tool for querying data sets (and their accessions) of interest which
can then be downloaded in a second call using the accessions.
]]>
    </help>
    <expand macro="citations"/>
</tool>