Mercurial > repos > iuc > ncbi_datasets
diff datasets_gene.xml @ 12:d78faac2c6ef draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_datasets commit affffdbe7237a2c0ba5793c0e7dd11cebb8413a9
| author | iuc |
|---|---|
| date | Sat, 03 Dec 2022 13:29:32 +0000 |
| parents | ac24fff14f23 |
| children | 1e188c9610c3 |
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--- a/datasets_gene.xml Fri Dec 02 10:52:48 2022 +0000 +++ b/datasets_gene.xml Sat Dec 03 13:29:32 2022 +0000 @@ -1,9 +1,11 @@ <tool id="datasets_download_gene" name="NCBI Datasets Gene" profile="@PROFILE@" license="@LICENSE@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> <description>download gene sequences and metadata</description> + <expand macro="bio_tools"/> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"></expand> + <expand macro="version_command"/> <command><![CDATA[ #import re @SETUP_CERTIFICATES@ @@ -286,7 +288,7 @@ <assert_contents> <has_text text="baboon"/> <has_text text="glyceraldehyde-3-phosphate dehydrogenase"/> - <has_n_lines n="31"/> + <has_n_lines min="30"/> <has_n_columns n="8"/> </assert_contents> </output> @@ -350,7 +352,7 @@ <assert_contents> <has_text text="house mouse"/> <has_text text="XR_004936704.1"/> - <has_n_lines n="137"/> + <has_n_lines min="130"/> <has_n_columns n="38"/> </assert_contents> </output> @@ -384,7 +386,7 @@ <assert_contents> <has_text text="rat"/> <has_text text="Brca1"/> - <has_n_lines n="38"/> + <has_n_lines min="30"/> <has_n_columns n="8"/> </assert_contents> </output> @@ -430,7 +432,7 @@ <output name="gene_data_report"> <assert_contents> <has_text text="human"/> - <has_n_lines n="823"/> + <has_n_lines min="800"/> <has_n_columns n="8"/> </assert_contents> </output> @@ -488,7 +490,7 @@ <output name="gene_data_report"> <assert_contents> <has_text text="human"/> - <has_n_lines n="72533"/> + <has_n_lines min="72000"/> <has_n_columns n="8"/> </assert_contents> </output> @@ -513,7 +515,7 @@ <output name="gene_data_report"> <assert_contents> <has_text text="human"/> - <has_n_lines n="72533"/> + <has_n_lines min="72000"/> <has_n_columns n="8"/> </assert_contents> </output>