Mercurial > repos > iuc > ncbi_eutils_egquery
diff egquery.py @ 0:9d18e6815994 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 15bcc5104c577b4b9c761f2854fc686c07ffa9db
author | iuc |
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date | Thu, 07 Jul 2016 02:39:52 -0400 |
parents | |
children | 28f69754ddc5 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/egquery.py Thu Jul 07 02:39:52 2016 -0400 @@ -0,0 +1,20 @@ +#!/usr/bin/env python +import argparse +import eutils + + +if __name__ == '__main__': + parser = argparse.ArgumentParser(description='EGQuery', epilog='') + parser.add_argument('term', help='Query') + # + parser.add_argument('--user_email', help="User email") + parser.add_argument('--admin_email', help="Admin email") + args = parser.parse_args() + + c = eutils.Client(user_email=args.user_email, admin_email=args.admin_email) + + payload = { + 'term': args.term, + } + results = c.gquery(**payload) + print results