Mercurial > repos > iuc > ncbi_eutils_einfo
diff einfo.xml @ 0:32ac58827a97 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 15bcc5104c577b4b9c761f2854fc686c07ffa9db
author | iuc |
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date | Thu, 07 Jul 2016 02:40:06 -0400 |
parents | |
children | f6007bce569d |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/einfo.xml Thu Jul 07 02:40:06 2016 -0400 @@ -0,0 +1,39 @@ +<?xml version="1.0"?> +<tool id="ncbi_eutils_einfo" name="NCBI EInfo" version="@WRAPPER_VERSION@"> + <description>fetch NCBI database metadata</description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements"/> + <version_command>python einfo.py --version</version_command> + <command detect_errors="aggressive" interpreter="python"><![CDATA[einfo.py +--db $db_select + +@EMAIL_ARGUMENTS@ +> $default]]></command> + <inputs> + <expand macro="dbselect"/> + </inputs> + <outputs> + <data format="xml" name="default" label="NCBI Database Information: $db_select"/> + </outputs> + <tests> + <test> + <param name="db_select" value="pubmed"/> + <output name="default" file="pubmed.metadata.xml" compare="contains" ftype="xml"/> + </test> + </tests> + <help><![CDATA[ +NCBI Entrez EInfo +================= + +Provides the number of records indexed in each field of a given database, the +date of the last update of the database, and the available links from the +database to other Entrez databases. + +@REFERENCES@ + +@DISCLAIMER@ + ]]></help> + <expand macro="citations"/> +</tool>