Mercurial > repos > iuc > ncbi_eutils_epost
comparison epost.xml @ 0:18e6b25259ff draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 15bcc5104c577b4b9c761f2854fc686c07ffa9db
author | iuc |
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date | Thu, 07 Jul 2016 02:40:33 -0400 |
parents | |
children | 7d868844e952 |
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-1:000000000000 | 0:18e6b25259ff |
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1 <?xml version="1.0"?> | |
2 <tool id="ncbi_eutils_epost" name="NCBI EPost" version="@WRAPPER_VERSION@"> | |
3 <description>post UIDs to NCBI History Server</description> | |
4 <macros> | |
5 <import>macros.xml</import> | |
6 </macros> | |
7 <expand macro="requirements"/> | |
8 <version_command>python epost.py --version</version_command> | |
9 <command detect_errors="aggressive" interpreter="python"><![CDATA[epost.py | |
10 $db_select | |
11 | |
12 @EMAIL_ARGUMENTS@ | |
13 | |
14 @LIST_OR_HIST@ | |
15 | |
16 > $history | |
17 ]]></command> | |
18 <inputs> | |
19 <expand macro="dbselect"/> | |
20 <expand macro="list_or_hist"/> | |
21 </inputs> | |
22 <outputs> | |
23 <expand macro="history_out"/> | |
24 </outputs> | |
25 <tests> | |
26 <test> | |
27 <param name="db_select" value="nuccore"/> | |
28 <param name="qss" value="id_list"/> | |
29 <param name="id_list" value="126697566"/> | |
30 <output name="history" file="example.history.json" compare="sim_size" delta="10" ftype="json"/> | |
31 </test> | |
32 </tests> | |
33 <help><![CDATA[ | |
34 NCBI Entrez EPost | |
35 ================= | |
36 | |
37 Accepts a list of UIDs from a given database, stores the set on the History | |
38 Server, and responds with an NCBI History reference. | |
39 | |
40 @REFERENCES@ | |
41 | |
42 @DISCLAIMER@ | |
43 ]]></help> | |
44 <expand macro="citations"/> | |
45 </tool> |