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annotate test-data/output.sum @ 0:ce13b4c42256 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
author iuc
date Wed, 21 Feb 2024 19:27:16 +0000
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ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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1 #The selected clade was Hominidae
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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2 #Number of conserved HOGs is: 17786
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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3 #Results on conserved HOGs is:
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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4 #S:Single:S, D:Duplicated[U:Unexpected,E:Expected],M:Missing
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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5 S:39,D:0[U:0,E:0],M:17747
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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6 S:0.22%,D:0.00%[U:0.00%,E:0.00%],M:99.78%
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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7 #On the whole proteome, there are 44 proteins
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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8 #Of which:
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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9 #A:Consistent (taxonomically)[P:Partial hits,F:Fragmented], I: Inconsistent (taxonomically)[P:Partial hits,F:Fragmented], C: Likely Contamination[P:Partial hits,F:Fragmented], U: Unknown
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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10 A:43[P:0,F:0],I:1[P:0,F:0],C:0[P:0,F:0],U:0
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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11 A:97.73%[P:0.00%,F:0.00%],I:2.27%[P:0.00%,F:0.00%],C:0.00%[P:0.00%,F:0.00%],U:0.00%
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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12 #From HOG placement, the detected species are:
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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13 #Clade NCBI taxid Number of associated proteins Percentage of proteome's total
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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14 Homo sapiens 9606 44 100.00%
ce13b4c42256 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/omark/ commit 8ff9ada22d22cb94ddfff51bcdd3ab7d30104f1a
iuc
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15