diff get_parent_terms_by_relationship_type.xml @ 0:8e81546cdee9 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/get_parent_terms_by_relationship_type.xml	Fri Nov 10 11:30:46 2017 -0500
@@ -0,0 +1,51 @@
+<tool id="onto_tk_get_parent_terms_by_relationship_type" name="Get the terms" version="@VERSION@.0">
+    <description>filtered by a relationship type</description>
+    <macros>
+        <import>onto_macros.xml</import>
+    </macros>
+    <expand macro="requirements" />
+    <command detect_errors="aggressive">
+    perl '$__tool_directory__/get_parent_terms_by_relationship_type.pl'
+        '$input'
+        '$term_id'
+        '$rel_id' > '$output'
+    </command>
+    <inputs>
+        <expand macro="input_ontology" />
+        <expand macro="term_id" />
+        <expand macro="rel_id" />
+    </inputs>
+    <outputs>
+        <data format="tabular" name="output" label="Parent terms of ${on_string} by $rel_id"/>
+    </outputs>
+    <tests>
+        <test>
+            <param name="input" value="pre_cco_core.obo" ftype="obo"/>
+            <param name="term_id" value="CCO:P0000019"/>
+            <param name="rel_id" value="part_of"/>
+            <output name="output" file="ancestors_rel_filtered.tab" ftype="tabular"/>
+        </test>
+    </tests>
+    <help>
+
+.. class:: infomark
+
+Collects the terms (list of IDs) from a given term (existing ID) through a given relationship type in the given OBO ontology.
+**Example**
+
+id: A 
+name: A
+A part_of B
+A part_of D
+A participates_in F
+
+
+If you ask for the parent terms of **A** along part_of you will get::
+
+  B
+  D
+
+    </help>
+    <expand macro="citations" />
+</tool>
+