Mercurial > repos > iuc > onto_tk_get_relationship_id_vs_relationship_name
annotate onto_macros.xml @ 1:42ec3e9fdf7b draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 744e26ea6d468c83ec5904221929092f8a2e78ba"
author | iuc |
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date | Wed, 22 Jan 2020 17:24:25 -0500 |
parents | e3e11b9e7750 |
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rev | line source |
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e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
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changeset
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1 <macros> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
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2 <token name="@VERSION@">1.45</token> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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3 <xml name="requirements"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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4 <requirements> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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5 <requirement type="package" version="@VERSION@">perl-onto-perl</requirement> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
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6 <yield /> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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7 </requirements> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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8 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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9 <xml name="input_ontology"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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10 <param name="input" format="obo" type="data" label="Ontology file"/> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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11 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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12 <xml name="term_id"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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13 <param name="term_id" type="text" value="" label="Term ID"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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14 <expand macro="sanitize_ids" /> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
|
15 </param> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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16 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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17 <xml name="rel_id"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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18 <param name="rel_id" type="text" value="" label="Relationship ID"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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19 <expand macro="sanitize_ids" /> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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20 </param> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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21 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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22 <xml name="citations"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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23 <citations> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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24 <citation type="doi">10.1186/1471-2105-11-S12-S8</citation> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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25 </citations> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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26 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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27 <xml name="sanitize_ids"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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28 <sanitizer invalid_char=""> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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29 <valid initial="string.letters,string.digits"><add value="_" /><add value=":" /> </valid> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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30 </sanitizer> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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31 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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32 <xml name="sanitize_urls"> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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33 <sanitizer invalid_char=""> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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34 <valid initial="string.letters,string.digits"><add value="_" /><add value=":" /><add value="/" /></valid> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
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35 </sanitizer> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
changeset
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36 </xml> |
e3e11b9e7750
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff
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37 </macros> |