Mercurial > repos > iuc > onto_tk_get_relationship_id_vs_relationship_name

annotate test-data/lowest_common_ancestor.tab @ 1:42ec3e9fdf7b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 744e26ea6d468c83ec5904221929092f8a2e78ba"
author iuc
date Wed, 22 Jan 2020 17:24:25 -0500
parents e3e11b9e7750
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
1
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
2 description: Get the lowest common ancestor (LCA) of two terms in a given OBO ontology.
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
3 usage : get_lowest_common_ancestor.pl [options]
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
4 options :
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
5 -f OBO input file
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
6 -a term 1 ID
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
7 -b term 2 ID
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
8 example:
e3e11b9e7750 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
iuc
parents:
diff changeset
9 perl get_lowest_common_ancestor.pl -f go.obo -t GO:0000234 -t GO:0000111