Mercurial > repos > iuc > onto_tk_get_relationship_id_vs_relationship_name
view get_relationship_id_vs_relationship_name.xml @ 0:e3e11b9e7750 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
author | iuc |
---|---|
date | Fri, 10 Nov 2017 11:35:28 -0500 |
parents | |
children | 42ec3e9fdf7b |
line wrap: on
line source
<tool id="onto_tk_get_relationship_id_vs_relationship_name" name="Get all the relationship IDs and names" version="@VERSION@.0"> <description>from the given OBO ontology</description> <macros> <import>onto_macros.xml</import> </macros> <expand macro="requirements" /> <command detect_errors="aggressive"> get_relationship_id_vs_relationship_name.pl -f '$input' | sort > '$output' </command> <inputs> <expand macro="input_ontology" /> </inputs> <outputs> <data format="tabular" name="output" label="Relationship IDs and names of ${on_string}"> <actions> <action name="column_names" type="metadata" default="releationship ID,releationship name" /> </actions> </data> </outputs> <tests> <test> <param name="input" value="pre_cco_core.obo"/> <output name="output" file="relationship_id_vs_relationship_name.tab"/> </test> </tests> <help> .. class:: infomark Generates a flat file with two columns (TAB separated) with the relationship_id and relationship_name from the elements of the given OBO ontology. </help> <expand macro="citations" /> </tool>