Mercurial > repos > iuc > onto_tk_get_term_synonyms
diff test-data/terms.tab @ 0:3747710b8936 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
author | iuc |
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date | Fri, 10 Nov 2017 11:33:45 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/terms.tab Fri Nov 10 11:33:45 2017 -0500 @@ -0,0 +1,391 @@ +CCO:B0000000 core cell cycle protein +CCO:P0000001 mitotic spindle elongation +CCO:P0000002 mitotic sister chromatid segregation +CCO:P0000003 M phase specific microtubule process +CCO:P0000004 regulation of progression through cell cycle +CCO:P0000005 cell cycle checkpoint +CCO:P0000006 DNA replication checkpoint +CCO:P0000007 DNA damage checkpoint +CCO:P0000008 cell morphogenesis checkpoint +CCO:P0000009 regulation of cyclin-dependent protein kinase activity +CCO:P0000010 G1 phase of mitotic cell cycle +CCO:P0000011 G1/S transition of mitotic cell cycle +CCO:P0000012 G1/S-specific transcription in mitotic cell cycle +CCO:P0000013 S phase of mitotic cell cycle +CCO:P0000014 G2 phase of mitotic cell cycle +CCO:P0000015 G2/M transition of mitotic cell cycle +CCO:P0000016 M phase of mitotic cell cycle +CCO:P0000017 mitotic prophase +CCO:P0000018 mitotic metaphase +CCO:P0000019 mitotic anaphase +CCO:P0000020 mitotic anaphase A +CCO:P0000021 mitotic anaphase B +CCO:P0000022 mitotic telophase +CCO:P0000023 G1-specific transcription in mitotic cell cycle +CCO:P0000024 S-phase-specific transcription in mitotic cell cycle +CCO:P0000025 G2-specific transcription in mitotic cell cycle +CCO:P0000026 G2/M-specific transcription in mitotic cell cycle +CCO:P0000027 establishment of mitotic spindle orientation +CCO:P0000028 septin checkpoint +CCO:P0000029 meiotic spindle organization and biogenesis +CCO:P0000030 M/G1 transition of mitotic cell cycle +CCO:P0000031 mitotic prometaphase +CCO:P0000032 leptotene +CCO:P0000033 zygotene +CCO:P0000034 pachytene +CCO:P0000035 diplotene +CCO:P0000036 diakinesis +CCO:P0000037 mitotic cell cycle +CCO:P0000038 M phase +CCO:P0000039 cytokinesis after mitosis +CCO:P0000040 re-entry into mitotic cell cycle +CCO:P0000041 re-entry into mitotic cell cycle after pheromone arrest +CCO:P0000042 achiasmate meiosis I +CCO:P0000043 meiotic DNA double-strand break processing +CCO:P0000044 meiotic DNA recombinase assembly +CCO:P0000045 meiotic strand invasion +CCO:P0000046 meiotic joint molecule formation +CCO:P0000047 meiotic mismatch repair +CCO:P0000048 meiotic DNA repair synthesis +CCO:P0000049 resolution of meiotic joint molecules as recombinants +CCO:P0000050 meiotic heteroduplex formation +CCO:P0000051 meiotic strand displacement +CCO:P0000052 cell cycle arrest in response to pheromone +CCO:P0000053 negative regulation of exit from mitosis +CCO:P0000054 meiotic gene conversion +CCO:P0000055 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest +CCO:P0000056 cell cycle +CCO:P0000057 cell cycle arrest +CCO:P0000058 mitotic spindle organization and biogenesis +CCO:P0000059 male meiotic spindle assembly (sensu Metazoa) +CCO:P0000060 male meiosis I spindle assembly (sensu Metazoa) +CCO:P0000061 male meiosis II spindle assembly (sensu Metazoa) +CCO:P0000062 female meiotic spindle assembly (sensu Metazoa) +CCO:P0000063 female meiosis I spindle assembly (sensu Metazoa) +CCO:P0000064 female meiosis II spindle assembly (sensu Metazoa) +CCO:P0000065 male meiosis chromosome segregation +CCO:P0000066 mitotic sister chromatid cohesion +CCO:P0000067 male meiosis sister chromatid cohesion +CCO:P0000068 female meiosis sister chromatid cohesion +CCO:P0000069 mitosis +CCO:P0000070 negative regulation of transcription, mitotic +CCO:P0000071 negative regulation of transcription from RNA polymerase I promoter, mitotic +CCO:P0000072 negative regulation of transcription from RNA polymerase II promoter, mitotic +CCO:P0000073 negative regulation of transcription from RNA polymerase III promoter, mitotic +CCO:P0000074 activation of transcription on exit from mitosis +CCO:P0000075 activation of transcription on exit from mitosis, from RNA polymerase I promoter +CCO:P0000076 activation of transcription on exit from mitosis, from RNA polymerase II promoter +CCO:P0000077 activation of transcription on exit from mitosis, from RNA polymerase III promoter +CCO:P0000078 mitotic chromosome condensation +CCO:P0000079 mitotic nuclear envelope disassembly +CCO:P0000080 lamin depolymerization +CCO:P0000081 mitotic chromosome movement towards spindle pole +CCO:P0000082 mitotic metaphase plate congression +CCO:P0000083 mitotic chromosome decondensation +CCO:P0000084 mitotic nuclear envelope reassembly +CCO:P0000085 vesicle fusion with nuclear membrane +CCO:P0000086 mitotic nuclear pore complex reassembly +CCO:P0000087 regulation of mitosis +CCO:P0000088 traversing start control point of mitotic cell cycle +CCO:P0000089 regulation of S phase of mitotic cell cycle +CCO:P0000090 mitotic metaphase/anaphase transition +CCO:P0000091 anaphase-promoting complex activation during mitotic cell cycle +CCO:P0000092 mitotic checkpoint +CCO:P0000093 mitotic spindle checkpoint +CCO:P0000094 mitotic G2 checkpoint +CCO:P0000095 regulation of exit from mitosis +CCO:P0000096 centrosome cycle +CCO:P0000097 centriole replication +CCO:P0000098 mitotic centrosome separation +CCO:P0000099 male meiosis centrosome cycle +CCO:P0000100 cytokinesis after meiosis I +CCO:P0000101 cytokinesis after meiosis II +CCO:P0000102 endomitotic cell cycle +CCO:P0000103 meiosis +CCO:P0000104 meiosis I +CCO:P0000105 meiotic prophase I +CCO:P0000106 synapsis +CCO:P0000107 synaptonemal complex assembly +CCO:P0000108 meiotic recombination +CCO:P0000109 meiotic metaphase I +CCO:P0000110 meiotic anaphase I +CCO:P0000111 meiotic telophase I +CCO:P0000112 meiosis II +CCO:P0000113 meiotic prophase II +CCO:P0000114 meiotic metaphase II +CCO:P0000115 meiotic anaphase II +CCO:P0000116 meiotic telophase II +CCO:P0000117 male meiosis +CCO:P0000118 male meiosis I +CCO:P0000119 male meiosis II +CCO:P0000120 female meiosis +CCO:P0000121 female meiosis I +CCO:P0000122 meiotic recombination nodule assembly +CCO:P0000123 female meiosis II +CCO:P0000124 regulation of progression through mitotic cell cycle +CCO:P0000125 regulation of progression through preblastoderm mitotic cell cycle +CCO:P0000126 regulation of progression through syncytial blastoderm mitotic cell cycle +CCO:P0000127 cyclin catabolic process +CCO:P0000128 meiotic G2/MI transition +CCO:P0000129 regulation of progression through embryonic mitotic cell cycle +CCO:P0000130 cell plate formation (sensu Magnoliophyta) +CCO:P0000131 male meiotic spindle assembly (sensu Viridiplantae) +CCO:P0000132 female meiosis chromosome segregation +CCO:P0000133 second mitotic wave (sensu Endopterygota) +CCO:P0000134 meiotic chromosome movement towards spindle pole +CCO:P0000135 female meiotic chromosome movement towards spindle pole +CCO:P0000136 male meiotic chromosome movement towards spindle pole +CCO:P0000137 modification by virus of host cell cycle regulation +CCO:P0000138 actin filament reorganization during cell cycle +CCO:P0000139 regulation of mitotic metaphase/anaphase transition +CCO:P0000140 mitotic spindle organization and biogenesis in nucleus +CCO:P0000141 horsetail nuclear movement +CCO:P0000142 cell cycle arrest in response to nitrogen starvation +CCO:P0000143 regulation of centriole-centriole cohesion +CCO:P0000144 linear element formation +CCO:P0000145 septation initiation signaling +CCO:P0000146 regulation of septation initiation signaling +CCO:P0000147 negative regulation of septation initiation signaling +CCO:P0000148 positive regulation of septation initiation signaling +CCO:P0000149 sister chromatid biorientation +CCO:P0000150 collapsed replication fork processing +CCO:P0000151 positive regulation of exit from mitosis +CCO:P0000152 cytokinesis checkpoint +CCO:P0000153 cytokinesis, contractile ring maintenance +CCO:P0000154 cell size control checkpoint +CCO:P0000155 G1/S transition size control checkpoint +CCO:P0000156 G2/M transition size control checkpoint +CCO:P0000157 DNA integrity checkpoint +CCO:P0000158 G1 DNA damage checkpoint +CCO:P0000159 G2/M transition DNA damage checkpoint +CCO:P0000160 intra-S DNA damage checkpoint +CCO:P0000161 S-M checkpoint +CCO:P0000162 G1/S transition checkpoint +CCO:P0000163 G2/M transition checkpoint +CCO:P0000164 spindle checkpoint +CCO:P0000165 spindle orientation checkpoint +CCO:P0000166 homologous chromosome orientation during meiosis +CCO:P0000167 G1/S-specific regulation of cyclin-dependent protein kinase activity +CCO:P0000168 G1/S-specific negative regulation of cyclin-dependent protein kinase activity +CCO:P0000169 G1/S-specific positive regulation of cyclin-dependent protein kinase activity +CCO:P0000170 G2/M-specific regulation of cyclin-dependent protein kinase activity +CCO:P0000171 G2/M-specific negative regulation of cyclin-dependent protein kinase activity +CCO:P0000172 G2/M-specific positive regulation of cyclin-dependent protein kinase activity +CCO:P0000173 regulation of contractile ring contraction during cytokinesis +CCO:P0000174 attachment of telomeres to spindle pole body +CCO:P0000175 preblastoderm mitotic cell cycle +CCO:P0000176 syncytial blastoderm mitotic cell cycle +CCO:P0000177 establishment of mitotic spindle localization +CCO:P0000178 regulation of meiosis +CCO:P0000179 polar body extrusion after meiotic divisions +CCO:P0000180 meiotic DNA double-strand break formation +CCO:P0000181 early meiotic recombination nodule assembly +CCO:P0000182 late meiotic recombination nodule assembly +CCO:P0000183 meiotic metaphase I plate congression +CCO:P0000184 meiotic metaphase II plate congression +CCO:P0000185 meiotic spindle stabilization +CCO:P0000186 mitotic spindle stabilization +CCO:P0000187 G0 to G1 transition +CCO:P0000188 negative regulation of meiotic recombination +CCO:P0000189 meiotic chromosome segregation +CCO:P0000190 telomere clustering +CCO:P0000191 homologous chromosome segregation +CCO:P0000192 meiotic sister chromatid segregation +CCO:P0000193 mitotic cell cycle, embryonic +CCO:P0000194 negative regulation of cyclin-dependent protein kinase activity +CCO:P0000195 positive regulation of cyclin-dependent protein kinase activity +CCO:P0000196 negative regulation of S phase of mitotic cell cycle +CCO:P0000197 positive regulation of S phase of mitotic cell cycle +CCO:P0000198 negative regulation of progression through cell cycle +CCO:P0000199 positive regulation of progression through cell cycle +CCO:P0000200 negative regulation of meiosis +CCO:P0000201 positive regulation of meiosis +CCO:P0000202 negative regulation of mitosis +CCO:P0000203 positive regulation of mitosis +CCO:P0000204 negative regulation of mitotic metaphase/anaphase transition +CCO:P0000205 positive regulation of mitotic metaphase/anaphase transition +CCO:P0000206 regulation of transcription, mitotic +CCO:P0000207 positive regulation of transcription, mitotic +CCO:P0000208 negative regulation of progression through mitotic cell cycle +CCO:P0000209 positive regulation of progression through mitotic cell cycle +CCO:P0000210 negative regulation of progression through embryonic mitotic cell cycle +CCO:P0000211 positive regulation of mitotic cell cycle, embryonic +CCO:P0000212 negative regulation of progression through preblastoderm mitotic cell cycle +CCO:P0000213 positive regulation of progression through preblastoderm mitotic cell cycle +CCO:P0000214 negative regulation of progression through syncytial blastoderm mitotic cell cycle +CCO:P0000215 positive regulation of progression through syncytial blastoderm mitotic cell cycle +CCO:P0000216 regulation of transcription from RNA polymerase I promoter, mitotic +CCO:P0000217 positive regulation of transcription from RNA polymerase I promoter, mitotic +CCO:P0000218 regulation of transcription from RNA polymerase II promoter, mitotic +CCO:P0000219 positive regulation of transcription from RNA polymerase II promoter, mitotic +CCO:P0000220 regulation of transcription from RNA polymerase III promoter, mitotic +CCO:P0000221 positive regulation of transcription from RNA polymerase III promoter, mitotic +CCO:P0000222 regulation of centriole replication +CCO:P0000223 negative regulation of centriole replication +CCO:P0000224 positive regulation of centriole replication +CCO:P0000225 regulation of mitotic centrosome separation +CCO:P0000226 negative regulation of mitotic centrosome separation +CCO:P0000227 positive regulation of mitotic centrosome separation +CCO:P0000228 regulation of centrosome cycle +CCO:P0000229 negative regulation of centrosome cycle +CCO:P0000230 positive regulation of centrosome cycle +CCO:P0000231 suppression by virus of host cell cycle arrest +CCO:P0000232 replication fork protection +CCO:P0000233 chiasma formation +CCO:P0000234 regulation of transcription, meiotic +CCO:P0000235 negative regulation of transcription, meiotic +CCO:P0000236 positive regulation of transcription, meiotic +CCO:P0000237 meiotic nuclear envelope disassembly +CCO:P0000238 meiosis I nuclear envelope disassembly +CCO:P0000239 meiosis II nuclear envelope disassembly +CCO:P0000240 meiotic sister chromatid cohesion +CCO:P0000241 meiotic chromosome decondensation +CCO:P0000242 meiotic spindle assembly +CCO:P0000243 mitotic spindle assembly +CCO:P0000244 mitotic spindle disassembly +CCO:P0000245 meiotic spindle disassembly +CCO:P0000246 meiotic spindle elongation +CCO:P0000247 mitotic spindle midzone assembly +CCO:P0000248 meiotic spindle midzone assembly +CCO:P0000249 establishment of meiotic spindle localization +CCO:P0000250 establishment of meiotic spindle orientation +CCO:P0000251 centrosome duplication +CCO:P0000252 centrosome separation +CCO:P0000253 mitotic sister chromatid separation +CCO:P0000254 meiotic chromosome separation +CCO:P0000255 male meiosis chromosome separation +CCO:P0000256 female meiosis chromosome separation +CCO:P0000257 meiotic metaphase plate congression +CCO:P0000258 attachment of spindle microtubules to mitotic chromosome +CCO:P0000259 attachment of spindle microtubules to kinetochore during mitosis +CCO:P0000260 attachment of spindle microtubules to kinetochore during meiotic chromosome segregation +CCO:P0000261 attachment of spindle microtubules to meiotic chromosome +CCO:P0000262 G1 phase +CCO:P0000263 G2 phase +CCO:P0000264 S phase +CCO:P0000265 meiotic cell cycle +CCO:P0000266 anaphase +CCO:P0000267 metaphase +CCO:P0000268 prophase +CCO:P0000269 interphase +CCO:P0000270 telophase +CCO:P0000271 M phase of meiotic cell cycle +CCO:P0000272 interphase of meiotic cell cycle +CCO:P0000273 interphase of mitotic cell cycle +CCO:P0000274 G1 phase of meiotic cell cycle +CCO:P0000275 G2 phase of meiotic cell cycle +CCO:P0000276 S phase of meiotic cell cycle +CCO:P0000277 meiotic nuclear envelope reassembly +CCO:P0000278 meiosis I nuclear envelope reassembly +CCO:P0000279 meiosis II nuclear envelope reassembly +CCO:P0000280 interphase microtubule nucleation by interphase microtubule organizing center +CCO:P0000281 negative regulation of ubiquitin ligase activity during mitotic cell cycle +CCO:P0000282 positive regulation of ubiquitin ligase activity during mitotic cell cycle +CCO:P0000283 regulation of ubiquitin ligase activity during mitotic cell cycle +CCO:P0000284 regulation of ubiquitin ligase activity during meiotic cell cycle +CCO:P0000285 positive regulation of ubiquitin ligase activity during meiotic cell cycle +CCO:P0000286 negative regulation of ubiquitin ligase activity during meiotic cell cycle +CCO:P0000287 regulation of progression through meiotic cell cycle +CCO:P0000288 positive regulation of progression through meiotic cell cycle +CCO:P0000289 negative regulation of progression through meiotic cell cycle +CCO:P0000290 attachment of spindle microtubules to kinetochore during meiosis I +CCO:P0000291 attachment of spindle microtubules to kinetochore during meiosis II +CCO:P0000292 anaphase-promoting complex activation during meiotic cell cycle +CCO:P0000293 meiotic recombination checkpoint +CCO:P0000294 regulation of cell cycle +CCO:P0000295 cell cycle switching, meiotic to mitotic cell cycle +CCO:P0000296 cell cycle switching, mitotic to meiotic cell cycle +CCO:P0000297 germline cell cycle switching, mitotic to meiotic cell cycle +CCO:P0000298 meiotic sister chromatid cohesion, centromeric +CCO:P0000299 meiotic sister chromatid arm separation +CCO:P0000300 meiotic sister chromatid centromere separation +CCO:P0000301 meiotic sister chromatid separation +CCO:P0000302 homologous chromosome movement towards spindle pole during meiosis I +CCO:P0000303 sister chromosome movement towards spindle pole during meiosis II +CCO:P0000304 meiotic sister chromatid cohesion, arms +CCO:P0000305 lateral element assembly +CCO:P0000306 maintenance of contractile ring localization +CCO:P0000307 cell cycle arrest of committed forebrain neuronal progenitor cell +CCO:P0000308 cell cycle process +CCO:P0000309 cell cycle phase +CCO:P0000310 spindle elongation +CCO:P0000311 spindle midzone assembly +CCO:P0000312 chromosome separation +CCO:P0000313 distributive segregation +CCO:P0000314 regulation of spindle elongation +CCO:P0000315 regulation of mitotic spindle elongation +CCO:T0000001 Tetrapoda organism +CCO:T0000002 Ascomycota organism +CCO:T0000003 Theria organism +CCO:T0000004 Homo sapiens organism +CCO:T0000005 Coelomata organism +CCO:T0000006 Euteleostomi organism +CCO:T0000007 rosids organism +CCO:T0000008 Schizosaccharomyces organism +CCO:T0000009 Streptophyta organism +CCO:T0000010 Magnoliophyta organism +CCO:T0000011 organism +CCO:T0000012 Viridiplantae organism +CCO:T0000013 Schizosaccharomycetales organism +CCO:T0000014 Saccharomycetales organism +CCO:T0000015 eudicotyledons organism +CCO:T0000016 Saccharomyces cerevisiae organism +CCO:T0000017 Schizosaccharomyces pombe organism +CCO:T0000018 Euphyllophyta organism +CCO:T0000019 Saccharomyces organism +CCO:T0000020 Metazoa organism +CCO:T0000021 Homo/Pan/Gorilla group organism +CCO:T0000022 Brassicales organism +CCO:T0000023 Embryophyta organism +CCO:T0000024 Schizosaccharomycetes organism +CCO:T0000025 Fungi organism +CCO:T0000026 Teleostomi organism +CCO:T0000027 Brassicaceae organism +CCO:T0000028 Primates organism +CCO:T0000029 Hominoidea organism +CCO:T0000030 Tracheophyta organism +CCO:T0000031 Spermatophyta organism +CCO:T0000032 Eukaryota organism +CCO:T0000033 Arabidopsis thaliana organism +CCO:T0000034 Saccharomycetaceae organism +CCO:T0000035 Bilateria organism +CCO:T0000036 Vertebrata organism +CCO:T0000037 core eudicotyledons organism +CCO:T0000038 Saccharomycotina organism +CCO:T0000039 Saccharomycetes organism +CCO:T0000040 cellular organisms organism +CCO:T0000041 Fungi/Metazoa group organism +CCO:T0000042 Amniota organism +CCO:T0000043 Deuterostomia organism +CCO:T0000044 Craniata organism +CCO:T0000045 Chordata organism +CCO:T0000046 Catarrhini organism +CCO:T0000047 Simiiformes organism +CCO:T0000048 Eumetazoa organism +CCO:T0000049 Gnathostomata organism +CCO:T0000050 Sarcopterygii organism +CCO:T0000051 Streptophytina organism +CCO:T0000052 Homo organism +CCO:T0000053 Euarchontoglires organism +CCO:T0000054 Schizosaccharomycetaceae organism +CCO:T0000055 Mammalia organism +CCO:T0000056 Eutheria organism +CCO:T0000057 Arabidopsis organism +CCO:T0000058 Hominidae organism +CCO:T0000059 Haplorrhini organism +CCO:T0000060 eurosids II organism +CCO:U0000000 cell-cycle entity +CCO:U0000001 cell-cycle continuant +CCO:U0000002 cell-cycle process +CCO:U0000003 biopolymer +CCO:U0000004 gene +CCO:U0000005 protein +CCO:U0000006 transcript +CCO:U0000007 cell cycle protein +CCO:U0000008 cell cycle gene +CCO:U0000009 interaction +CCO:U0000010 complex +CCO:U0000011 modified protein +CCO:U0000012 cell cycle modified protein +CCO:U0000030 modified protein +CCO:Y0000025 physical association