Mercurial > repos > iuc > orfipy
comparison test-data/test2.fa @ 0:c147914c9f02 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/orfipy commit 9815d91c049d03a29d5d0f9040b0cbd7ea2d6a13
author | iuc |
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date | Wed, 25 May 2022 14:53:03 +0000 |
parents | |
children |
comparison
equal
deleted
inserted
replaced
-1:000000000000 | 0:c147914c9f02 |
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1 >pbr322_ORF.1 [258-639](+) type:complete length:381 frame:1 start:ATG stop:TAA | |
2 ATGCGCACCCGTTCTCGGAGCACTGTCCGACCGCTTTGGCCGCCGCCCAGTCCTGCTCGCTT | |
3 CGCTACTTGGAGCCACTATCGACTACGCGATCATGGCGACCACACCCGTCCTGTGGATCCTC | |
4 TACGCCGGACGCATCGTGGCCGGCATCACCGGCGCCACAGGTGCGGTTGCTGGCGCCTATAT | |
5 CGCCGACATCACCGATGGGGAAGATCGGGCTCGCCACTTCGGGCTCATGAGCGCTTGTTTCG | |
6 GCGTGGGTATGGTGGCAGGCCCCGTGGCCGGGGGACTGTTGGGCGCCATCTCCTTGCATGCA | |
7 CCATTCCTTGCGGCGGCGGTGCTCAACGGCCTCAACCTACTACTGGGCTGCTTCCTAATGCA | |
8 GGAGTCGCA | |
9 >pbr322_ORF.2 [780-1071](+) type:complete length:291 frame:1 start:CTG stop:TGA | |
10 CTGGGTCATTTTCGGCGAGGACCGCTTTCGCTGGAGCGCGACGATGATCGGCCTGTCGCTTG | |
11 CGGTATTCGGAATCTTGCACGCCCTCGCTCAAGCCTTCGTCACTGGTCCCGCCACCAAACGT | |
12 TTCGGCGAGAAGCAGGCCATTATCGCCGGCATGGCGGCCGACGCGCTGGGCTACGTCTTGCT | |
13 GGCGTTCGCGACGCGAGGCTGGATGGCCTTCCCCATTATGATTCTTCTCGCTTCCGGCGGCA | |
14 TCGGGATGCCCGCGTTGCAGGCCATGCTGTCCAGGCAGGTAGA | |
15 >pbr322_ORF.3 [1179-1515](+) type:complete length:336 frame:1 start:ATG stop:TAG | |
16 ATGGAACGGGTTGGCATGGATTGTAGGCGCCGCCCTATACCTTGTCTGCCTCCCCGCGTTGC | |
17 GTCGCGGTGCATGGAGCCGGGCCACCTCGACCTGAATGGAAGCCGGCGGCACCTCGCTAACG | |
18 GATTCACCACTCCAAGAATTGGAGCCAATCAATTCTTGCGGAGAACTGTGAATGCGCAAACC | |
19 AACCCTTGGCAGAACATATCCATCGCGTCCGCCATCTCCAGCAGCCGCACGCGGCGCATCTC | |
20 GGGCAGCGTTGGGTCCTGGCCACGGGTGCGCATGATCGTGCTCCTGTCGTTGAGGACCCGGC | |
21 TAGGCTGGCGGGGTTGCCTTACTGGT | |
22 >pbr322_ORF.4 [1626-1737](+) type:complete length:111 frame:1 start:CTG stop:TGA | |
23 CTGGAAACGCGGAAGTCAGCGCCCTGCACCATTATGTTCCGGATCTGCATCGCAGGATGCTG | |
24 CTGGCTACCCTGTGGAACACCTACATCTGTATTAACGAAGCGCTGGCAT | |
25 >pbr322_ORF.5 [1881-2103](+) type:complete length:222 frame:1 start:ATG stop:TGA | |
26 ATGAACAGAAATCCCCCTTACACGGAGGCATCAGTGACCAAACAGGAAAAAACCGCCCTTAA | |
27 CATGGCCCGCTTTATCAGAAGCCAGACATTAACGCTTCTGGAGAAACTCAACGAGCTGGACG | |
28 CGGATGAACAGGCAGACATCTGTGAATCGCTTCACGACCACGCTGATGAGCTTTACCGCAGC | |
29 TGCCTCGCGCGTTTCGGTGATGACGGTGAAAACCTC | |
30 >pbr322_ORF.6 [2553-2856](+) type:complete length:303 frame:1 start:CTG stop:TAA | |
31 CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAA | |
32 AGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT | |
33 TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT | |
34 GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCC | |
35 GTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG | |
36 >pbr322_ORF.7 [3027-3132](+) type:complete length:105 frame:1 start:TTG stop:TGA | |
37 TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAG | |
38 CAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTT | |
39 >pbr322_ORF.8 [3594-3819](+) type:complete length:225 frame:1 start:TTG stop:TAA | |
40 TTGTTGCCATTGCTGCAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGC | |
41 TCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAG | |
42 CTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTA | |
43 TGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCG | |
44 >pbr322_ORF.9 [3837-3942](+) type:complete length:105 frame:1 start:CTG stop:TAA | |
45 CTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGC | |
46 CCGGCGTCAACACGGGATAATACCGCGCCACATAGCAGAACTT | |
47 >pbr322_ORF.10 [85-1273](+) type:complete length:1188 frame:2 start:ATG stop:TGA | |
48 ATGAAATCTAACAATGCGCTCATCGTCATCCTCGGCACCGTCACCCTGGATGCTGTAGGCAT | |
49 AGGCTTGGTTATGCCGGTACTGCCGGGCCTCTTGCGGGATATCGTCCATTCCGACAGCATCG | |
50 CCAGTCACTATGGCGTGCTGCTAGCGCTATATGCGTTGATGCAATTTCTATGCGCACCCGTT | |
51 CTCGGAGCACTGTCCGACCGCTTTGGCCGCCGCCCAGTCCTGCTCGCTTCGCTACTTGGAGC | |
52 CACTATCGACTACGCGATCATGGCGACCACACCCGTCCTGTGGATCCTCTACGCCGGACGCA | |
53 TCGTGGCCGGCATCACCGGCGCCACAGGTGCGGTTGCTGGCGCCTATATCGCCGACATCACC | |
54 GATGGGGAAGATCGGGCTCGCCACTTCGGGCTCATGAGCGCTTGTTTCGGCGTGGGTATGGT | |
55 GGCAGGCCCCGTGGCCGGGGGACTGTTGGGCGCCATCTCCTTGCATGCACCATTCCTTGCGG | |
56 CGGCGGTGCTCAACGGCCTCAACCTACTACTGGGCTGCTTCCTAATGCAGGAGTCGCATAAG | |
57 GGAGAGCGTCGACCGATGCCCTTGAGAGCCTTCAACCCAGTCAGCTCCTTCCGGTGGGCGCG | |
58 GGGCATGACTATCGTCGCCGCACTTATGACTGTCTTCTTTATCATGCAACTCGTAGGACAGG | |
59 TGCCGGCAGCGCTCTGGGTCATTTTCGGCGAGGACCGCTTTCGCTGGAGCGCGACGATGATC | |
60 GGCCTGTCGCTTGCGGTATTCGGAATCTTGCACGCCCTCGCTCAAGCCTTCGTCACTGGTCC | |
61 CGCCACCAAACGTTTCGGCGAGAAGCAGGCCATTATCGCCGGCATGGCGGCCGACGCGCTGG | |
62 GCTACGTCTTGCTGGCGTTCGCGACGCGAGGCTGGATGGCCTTCCCCATTATGATTCTTCTC | |
63 GCTTCCGGCGGCATCGGGATGCCCGCGTTGCAGGCCATGCTGTCCAGGCAGGTAGATGACGA | |
64 CCATCAGGGACAGCTTCAAGGATCGCTCGCGGCTCTTACCAGCCTAACTTCGATCACTGGAC | |
65 CGCTGATCGTCACGGCGATTTATGCCGCCTCGGCGAGCACATGGAACGGGTTGGCATGGATT | |
66 GTAGGCGCCGCCCTATACCTTGTCTGCCTCCCCGCGTTGCGTCGCGGTGCATGGAGCCGGGC | |
67 CACCTCGACC | |
68 >pbr322_ORF.11 [1354-1459](+) type:complete length:105 frame:2 start:ATG stop:TGA | |
69 ATGCGCAAACCAACCCTTGGCAGAACATATCCATCGCGTCCGCCATCTCCAGCAGCCGCACG | |
70 CGGCGCATCTCGGGCAGCGTTGGGTCCTGGCCACGGGTGCGCA | |
71 >pbr322_ORF.12 [1510-1720](+) type:complete length:210 frame:2 start:CTG stop:TAA | |
72 CTGGTTAGCAGAATGAATCACCGATACGCGAGCGAACGTGAAGCGACTGCTGCTGCAAAACG | |
73 TCTGCGACCTGAGCAACAACATGAATGGTCTTCGGTTTCCGTGTTTCGTAAAGTCTGGAAAC | |
74 GCGGAAGTCAGCGCCCTGCACCATTATGTTCCGGATCTGCATCGCAGGATGCTGCTGGCTAC | |
75 CCTGTGGAACACCTACATCTGTAT | |
76 >pbr322_ORF.13 [2008-2215](+) type:complete length:207 frame:2 start:ATG stop:TGA | |
77 ATGAACAGGCAGACATCTGTGAATCGCTTCACGACCACGCTGATGAGCTTTACCGCAGCTGC | |
78 CTCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGACACATGCAGCTCCCGGAGACGGTCAC | |
79 AGCTTGTCTGTAAGCGGATGCCGGGAGCAGACAAGCCCGTCAGGGCGCGTCAGCGGGTGTTG | |
80 GCGGGTGTCGGGGCGCAGCCA | |
81 >pbr322_ORF.14 [2557-2728](+) type:5-prime-partial length:171 frame:2 start:NA stop:TAG | |
82 CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT | |
83 ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACC | |
84 GGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA | |
85 >pbr322_ORF.15 [3331-3538](+) type:complete length:207 frame:2 start:CTG stop:TAA | |
86 CTGTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGG | |
87 AGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCA | |
88 GATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTT | |
89 ATCCGCCTCCATCCAGTCTAT | |
90 >pbr322_ORF.16 [4042-4219](+) type:complete length:177 frame:2 start:CTG stop:TGA | |
91 CTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAA | |
92 ATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTTTT | |
93 CAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATT | |
94 >pbr322_ORF.17 [293-491](+) type:complete length:198 frame:3 start:TTG stop:TGA | |
95 TTGGCCGCCGCCCAGTCCTGCTCGCTTCGCTACTTGGAGCCACTATCGACTACGCGATCATG | |
96 GCGACCACACCCGTCCTGTGGATCCTCTACGCCGGACGCATCGTGGCCGGCATCACCGGCGC | |
97 CACAGGTGCGGTTGCTGGCGCCTATATCGCCGACATCACCGATGGGGAAGATCGGGCTCGCC | |
98 ACTTCGGGCTCA | |
99 >pbr322_ORF.18 [839-1004](+) type:complete length:165 frame:3 start:TTG stop:TGA | |
100 TTGCGGTATTCGGAATCTTGCACGCCCTCGCTCAAGCCTTCGTCACTGGTCCCGCCACCAAA | |
101 CGTTTCGGCGAGAAGCAGGCCATTATCGCCGGCATGGCGGCCGACGCGCTGGGCTACGTCTT | |
102 GCTGGCGTTCGCGACGCGAGGCTGGATGGCCTTCCCCATTA | |
103 >pbr322_ORF.19 [1370-1523](+) type:complete length:153 frame:3 start:TTG stop:TGA | |
104 TTGGCAGAACATATCCATCGCGTCCGCCATCTCCAGCAGCCGCACGCGGCGCATCTCGGGCA | |
105 GCGTTGGGTCCTGGCCACGGGTGCGCATGATCGTGCTCCTGTCGTTGAGGACCCGGCTAGGC | |
106 TGGCGGGGTTGCCTTACTGGTTAGCAGAA | |
107 >pbr322_ORF.20 [1556-1808](+) type:complete length:252 frame:3 start:CTG stop:TAA | |
108 CTGCTGCTGCAAAACGTCTGCGACCTGAGCAACAACATGAATGGTCTTCGGTTTCCGTGTTT | |
109 CGTAAAGTCTGGAAACGCGGAAGTCAGCGCCCTGCACCATTATGTTCCGGATCTGCATCGCA | |
110 GGATGCTGCTGGCTACCCTGTGGAACACCTACATCTGTATTAACGAAGCGCTGGCATTGACC | |
111 CTGAGTGATTTTTCTCTGGTCCCGCCGCATCCATACCGCCAGTTGTTTACCCTCACAACGTT | |
112 CCAG | |
113 >pbr322_ORF.21 [1817-1940](+) type:complete length:123 frame:3 start:ATG stop:TAA | |
114 ATGTTCATCATCAGTAACCCGTATCGTGAGCATCCTCTCTCGTTTCATCGGTATCATTACCC | |
115 CCATGAACAGAAATCCCCCTTACACGGAGGCATCAGTGACCAAACAGGAAAAAACCGCCCT | |
116 >pbr322_ORF.22 [2102-2228](+) type:complete length:126 frame:3 start:CTG stop:TAG | |
117 CTGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTAAGCGGATGCCGGGAGCAGAC | |
118 AAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCGCAGCCATGACCCAGTCA | |
119 CG | |
120 >pbr322_ORF.23 [2282-2477](+) type:complete length:195 frame:3 start:CTG stop:TGA | |
121 CTGAGAGTGCACCATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACCGCAT | |
122 CAGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAG | |
123 CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGA | |
124 AAGAACATG | |
125 >pbr322_ORF.24 [2777-3038](+) type:complete length:261 frame:3 start:CTG stop:TGA | |
126 CTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG | |
127 TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA | |
128 TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGC | |
129 TACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG | |
130 AGTTGGTAGCTCT | |
131 >pbr322_ORF.25 [3422-3686](+) type:complete length:264 frame:3 start:ATG stop:TGA | |
132 ATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGG | |
133 AAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTT | |
134 GCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCT | |
135 GCAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACG | |
136 ATCAAGGCGAGTTACA | |
137 >pbr322_ORF.26 [3695-3863](+) type:complete length:168 frame:3 start:ATG stop:TGA | |
138 ATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGC | |
139 CGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCG | |
140 TAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTC | |
141 >pbr322_ORF.27 [3875-4022](+) type:complete length:147 frame:3 start:ATG stop:TAA | |
142 ATGCGGCGACCGAGTTGCTCTTGCCCGGCGTCAACACGGGATAATACCGCGCCACATAGCAG | |
143 AACTTTAAAAGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTAC | |
144 CGCTGTTGAGATCCAGTTCGATG | |
145 >pbr322_ORF.28 [4052-4244](-) type:complete length:192 frame:-1 start:TTG stop:TGA | |
146 TTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAA | |
147 TGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT | |
148 CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAA | |
149 AGATGC | |
150 >pbr322_ORF.29 [2870-3161](-) type:complete length:291 frame:-1 start:CTG stop:TAA | |
151 CTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCG | |
152 TAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAA | |
153 GAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGT | |
154 CCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACC | |
155 TCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGA | |
156 >pbr322_ORF.30 [2612-2729](-) type:complete length:117 frame:-1 start:ATG stop:TAG | |
157 ATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGG | |
158 TCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTA | |
159 >pbr322_ORF.31 [2453-2564](-) type:complete length:111 frame:-1 start:ATG stop:TGA | |
160 ATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCC | |
161 TGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCC | |
162 >pbr322_ORF.32 [2060-2162](-) type:complete length:102 frame:-1 start:CTG stop:TAA | |
163 CTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAG | |
164 GTTTTCACCGTCATCACCGAAACGCGCGAGGCAGCTGCGG | |
165 >pbr322_ORF.33 [1901-2024](-) type:complete length:123 frame:-1 start:ATG stop:TAA | |
166 ATGTCTGCCTGTTCATCCGCGTCCAGCTCGTTGAGTTTCTCCAGAAGCGTTAATGTCTGGCT | |
167 TCTGATAAAGCGGGCCATGTTAAGGGCGGTTTTTTCCTGTTTGGTCACTGATGCCTCCGTG | |
168 >pbr322_ORF.34 [1517-1889](-) type:complete length:372 frame:-1 start:CTG stop:TAA | |
169 CTGTTCATGGGGGTAATGATACCGATGAAACGAGAGAGGATGCTCACGATACGGGTTACTGA | |
170 TGATGAACATGCCCGGTTACTGGAACGTTGTGAGGGTAAACAACTGGCGGTATGGATGCGGC | |
171 GGGACCAGAGAAAAATCACTCAGGGTCAATGCCAGCGCTTCGTTAATACAGATGTAGGTGTT | |
172 CCACAGGGTAGCCAGCAGCATCCTGCGATGCAGATCCGGAACATAATGGTGCAGGGCGCTGA | |
173 CTTCCGCGTTTCCAGACTTTACGAAACACGGAAACCGAAGACCATTCATGTTGTTGCTCAGG | |
174 TCGCAGACGTTTTGCAGCAGCAGTCGCTTCACGTTCGCTCGCGTATCGGTGATTCATTCTGC | |
175 >pbr322_ORF.35 [1334-1460](-) type:complete length:126 frame:-1 start:ATG stop:TGA | |
176 ATGCGCACCCGTGGCCAGGACCCAACGCTGCCCGAGATGCGCCGCGTGCGGCTGCTGGAGAT | |
177 GGCGGACGCGATGGATATGTTCTGCCAAGGGTTGGTTTGCGCATTCACAGTTCTCCGCAAGA | |
178 AT | |
179 >pbr322_ORF.36 [1151-1331](-) type:complete length:180 frame:-1 start:TTG stop:TGA | |
180 TTGGCTCCAATTCTTGGAGTGGTGAATCCGTTAGCGAGGTGCCGCCGGCTTCCATTCAGGTC | |
181 GAGGTGGCCCGGCTCCATGCACCGCGACGCAACGCGGGGAGGCAGACAAGGTATAGGGCGGC | |
182 GCCTACAATCCATGCCAACCCGTTCCATGTGCTCGCCGAGGCGGCATAAATCGCCG | |
183 >pbr322_ORF.37 [1004-1112](-) type:5-prime-partial length:108 frame:-1 start:NA stop:TAA | |
184 GAGCCGCGAGCGATCCTTGAAGCTGTCCCTGATGGTCGTCATCTACCTGCCTGGACAGCATG | |
185 GCCTGCAACGCGGGCATCCCGATGCCGCCGGAAGCGAGAAGAATCA | |
186 >pbr322_ORF.38 [158-308](-) type:complete length:150 frame:-1 start:CTG stop:TAA | |
187 CTGGGCGGCGGCCAAAGCGGTCGGACAGTGCTCCGAGAACGGGTGCGCATAGAAATTGCATC | |
188 AACGCATATAGCGCTAGCAGCACGCCATAGTGACTGGCGATGCTGTCGGAATGGACGATATC | |
189 CCGCAAGAGGCCCGGCAGTACCGGCA | |
190 >pbr322_ORF.39 [3295-4153](-) type:complete length:858 frame:-2 start:ATG stop:TAA | |
191 ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGT | |
192 TTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAG | |
193 TGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA | |
194 CGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTGTTGA | |
195 CGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACT | |
196 CACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC | |
197 ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGA | |
198 GCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGG | |
199 AGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGCAGCAATGGCAACA | |
200 ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGA | |
201 CTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGT | |
202 TTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG | |
203 CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGA | |
204 TGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG | |
205 >pbr322_ORF.40 [2965-3106](-) type:complete length:141 frame:-2 start:CTG stop:TAG | |
206 CTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCC | |
207 GGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAA | |
208 ATACTGTCCTTCTAGTG | |
209 >pbr322_ORF.41 [2587-2725](-) type:5-prime-partial length:138 frame:-2 start:NA stop:TGA | |
210 GAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGG | |
211 AACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCG | |
212 GGTTTCGCCACCTC | |
213 >pbr322_ORF.42 [1711-1831](-) type:complete length:120 frame:-2 start:CTG stop:TAG | |
214 CTGATGATGAACATGCCCGGTTACTGGAACGTTGTGAGGGTAAACAACTGGCGGTATGGATG | |
215 CGGCGGGACCAGAGAAAAATCACTCAGGGTCAATGCCAGCGCTTCGTTAATACAGATG | |
216 >pbr322_ORF.43 [1510-1645](-) type:complete length:135 frame:-2 start:CTG stop:TAA | |
217 CTGACTTCCGCGTTTCCAGACTTTACGAAACACGGAAACCGAAGACCATTCATGTTGTTGCT | |
218 CAGGTCGCAGACGTTTTGCAGCAGCAGTCGCTTCACGTTCGCTCGCGTATCGGTGATTCATT | |
219 CTGCTAACCAG | |
220 >pbr322_ORF.44 [625-1096](-) type:complete length:471 frame:-2 start:TTG stop:TAG | |
221 TTGAAGCTGTCCCTGATGGTCGTCATCTACCTGCCTGGACAGCATGGCCTGCAACGCGGGCA | |
222 TCCCGATGCCGCCGGAAGCGAGAAGAATCATAATGGGGAAGGCCATCCAGCCTCGCGTCGCG | |
223 AACGCCAGCAAGACGTAGCCCAGCGCGTCGGCCGCCATGCCGGCGATAATGGCCTGCTTCTC | |
224 GCCGAAACGTTTGGTGGCGGGACCAGTGACGAAGGCTTGAGCGAGGGCGTGCAAGATTCCGA | |
225 ATACCGCAAGCGACAGGCCGATCATCGTCGCGCTCCAGCGAAAGCGGTCCTCGCCGAAAATG | |
226 ACCCAGAGCGCTGCCGGCACCTGTCCTACGAGTTGCATGATAAAGAAGACAGTCATAAGTGC | |
227 GGCGACGATAGTCATGCCCCGCGCCCACCGGAAGGAGCTGACTGGGTTGAAGGCTCTCAAGG | |
228 GCATCGGTCGACGCTCTCCCTTATGCGACTCCTGCAT | |
229 >pbr322_ORF.45 [325-565](-) type:complete length:240 frame:-2 start:ATG stop:TAG | |
230 ATGCAAGGAGATGGCGCCCAACAGTCCCCCGGCCACGGGGCCTGCCACCATACCCACGCCGA | |
231 AACAAGCGCTCATGAGCCCGAAGTGGCGAGCCCGATCTTCCCCATCGGTGATGTCGGCGATA | |
232 TAGGCGCCAGCAACCGCACCTGTGGCGCCGGTGATGCCGGCCACGATGCGTCCGGCGTAGAG | |
233 GATCCACAGGACGGGTGTGGTCGCCATGATCGCGTAGTCGATAGTGGCTCCAAG | |
234 >pbr322_ORF.46 [58-196](-) type:complete length:138 frame:-2 start:ATG stop:TAA | |
235 ATGGACGATATCCCGCAAGAGGCCCGGCAGTACCGGCATAACCAAGCCTATGCCTACAGCAT | |
236 CCAGGGTGACGGTGCCGAGGATGACGATGAGCGCATTGTTAGATTTCATACACGGTGCCTGA | |
237 CTGCGTTAGCAATT | |
238 >pbr322_ORF.47 [3384-3513](-) type:complete length:129 frame:-3 start:TTG stop:TAG | |
239 TTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA | |
240 GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCG | |
241 TATCG | |
242 >pbr322_ORF.48 [2751-2886](-) type:complete length:135 frame:-3 start:CTG stop:TGA | |
243 CTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGAT | |
244 AAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGAC | |
245 CTACACCGAAC | |
246 >pbr322_ORF.49 [2370-2607](-) type:complete length:237 frame:-3 start:CTG stop:TGA | |
247 CTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGG | |
248 AGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTT | |
249 TGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTG | |
250 AGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAG | |
251 >pbr322_ORF.50 [1974-2175](-) type:complete length:201 frame:-3 start:CTG stop:TAA | |
252 CTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCT | |
253 GCATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGGCAGCTGCGGTAAAGCTCA | |
254 TCAGCGTGGTCGTGAAGCGATTCACAGATGTCTGCCTGTTCATCCGCGTCCAGCTCGTTGAG | |
255 TTTCTCCAGAAGCGT | |
256 >pbr322_ORF.51 [1530-1641](-) type:5-prime-partial length:111 frame:-3 start:NA stop:TGA | |
257 CTTCCGCGTTTCCAGACTTTACGAAACACGGAAACCGAAGACCATTCATGTTGTTGCTCAGG | |
258 TCGCAGACGTTTTGCAGCAGCAGTCGCTTCACGTTCGCTCGCGTATCGG | |
259 >pbr322_ORF.52 [1161-1377](-) type:complete length:216 frame:-3 start:CTG stop:TAA | |
260 CTGCCAAGGGTTGGTTTGCGCATTCACAGTTCTCCGCAAGAATTGATTGGCTCCAATTCTTG | |
261 GAGTGGTGAATCCGTTAGCGAGGTGCCGCCGGCTTCCATTCAGGTCGAGGTGGCCCGGCTCC | |
262 ATGCACCGCGACGCAACGCGGGGAGGCAGACAAGGTATAGGGCGGCGCCTACAATCCATGCC | |
263 AACCCGTTCCATGTGCTCGCCGAGGCGGCA | |
264 >pbr322_ORF.53 [957-1062](-) type:complete length:105 frame:-3 start:CTG stop:TAG | |
265 CTGGACAGCATGGCCTGCAACGCGGGCATCCCGATGCCGCCGGAAGCGAGAAGAATCATAAT | |
266 GGGGAAGGCCATCCAGCCTCGCGTCGCGAACGCCAGCAAGACG | |
267 >pbr322_ORF.54 [441-789](-) type:complete length:348 frame:-3 start:ATG stop:TAG | |
268 ATGACCCAGAGCGCTGCCGGCACCTGTCCTACGAGTTGCATGATAAAGAAGACAGTCATAAG | |
269 TGCGGCGACGATAGTCATGCCCCGCGCCCACCGGAAGGAGCTGACTGGGTTGAAGGCTCTCA | |
270 AGGGCATCGGTCGACGCTCTCCCTTATGCGACTCCTGCATTAGGAAGCAGCCCAGTAGTAGG | |
271 TTGAGGCCGTTGAGCACCGCCGCCGCAAGGAATGGTGCATGCAAGGAGATGGCGCCCAACAG | |
272 TCCCCCGGCCACGGGGCCTGCCACCATACCCACGCCGAAACAAGCGCTCATGAGCCCGAAGT | |
273 GGCGAGCCCGATCTTCCCCATCGGTGATGTCGGCGATA | |
274 >pbr322_ORF.55 [219-342](-) type:5-prime-partial length:123 frame:-3 start:NA stop:TAG | |
275 TCGATAGTGGCTCCAAGTAGCGAAGCGAGCAGGACTGGGCGGCGGCCAAAGCGGTCGGACAG | |
276 TGCTCCGAGAACGGGTGCGCATAGAAATTGCATCAACGCATATAGCGCTAGCAGCACGCCA | |
277 >pbr322_ORF.56 [75-213](-) type:complete length:138 frame:-3 start:CTG stop:TGA | |
278 CTGGCGATGCTGTCGGAATGGACGATATCCCGCAAGAGGCCCGGCAGTACCGGCATAACCAA | |
279 GCCTATGCCTACAGCATCCAGGGTGACGGTGCCGAGGATGACGATGAGCGCATTGTTAGATT | |
280 TCATACACGGTGCC | |
281 >puc18_ORF.1 [15-171](+) type:complete length:156 frame:1 start:ATG stop:TGA | |
282 ATGACGGTGAAAACCTCTGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTAAGCG | |
283 GATGCCGGGAGCAGACAAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTG | |
284 GCTTAACTATGCGGCATCAGAGCAGATTGTAC | |
285 >puc18_ORF.2 [684-810](+) type:complete length:126 frame:1 start:CTG stop:TAG | |
286 CTGAGCGTCAGACCCCAATTACACGCCACTGGCTGTGCTTGCTGGGGTGACGGTGGCAACGG | |
287 TGGCGGCCTTGCTGGGCTATCGCGTTGGAAAGAAACGAGGGAAAGGGGACTGATAAACCGGT | |
288 CT | |
289 >puc18_ORF.3 [822-951](+) type:complete length:129 frame:1 start:TTG stop:TAA | |
290 TTGGTGTCCAACCGCTCTGTAGGCCTCTCAGGCGCCGCTGGTGCCGCTGGTTGGACGCCAAG | |
291 GGTGAATCCGCCTCGATACCCTGATTACTCGCTTCCTGCGCCCTCTCAGGCGGCGATAGGGG | |
292 ACTGG | |
293 >puc18_ORF.4 [1155-1350](+) type:complete length:195 frame:1 start:TTG stop:TAG | |
294 TTGTTGTTAAGAAGGGACGGATTTGTTGTTGTAAAGGGACGGATTTGTTGTATTGTGGGACG | |
295 CAGATACAGTGTCCCCTTATACACAAGGAATGTCGAACGTGGCCTCACCCCCAATGGTTTAC | |
296 AAAAGCAATGCCCTGGTCGAGGCCGCGTATCGCCTCAGTGTTCAGGAACAGCGGATCGTTCT | |
297 GGCCTGTAT | |
298 >puc18_ORF.5 [1836-1962](+) type:5-prime-partial length:126 frame:1 start:NA stop:TAA | |
299 TCCAGCCGTGACGCAGATCAACGAGCACAGCCCGCTACAGGTGGAGTGGGCGCAGCGAAAGA | |
300 CCGGGCGCAAGGTCACACATCTGTTGTTCAGTTTTGGACCGAAGAAGCCCGCCAAGGCGGTG | |
301 GG | |
302 >puc18_ORF.6 [2037-2250](+) type:complete length:213 frame:1 start:ATG stop:TAA | |
303 ATGGGAAGCGGCCCGCGCTCGACTAACCCAGATGCCGCTGGATCTGGCCTAGAGGCCGTGGC | |
304 CACCACGGCCCGGCCTGCCTTTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCC | |
305 TCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAAC | |
306 GCCAGGGTTTTCCCAGTCACGACGTTG | |
307 >puc18_ORF.7 [2451-2634](+) type:complete length:183 frame:1 start:TTG stop:TAA | |
308 TTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGA | |
309 ATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCAC | |
310 TGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGG | |
311 >puc18_ORF.8 [2757-3060](+) type:complete length:303 frame:1 start:CTG stop:TAA | |
312 CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAA | |
313 AGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT | |
314 TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT | |
315 GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCC | |
316 GTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG | |
317 >puc18_ORF.9 [3231-3336](+) type:complete length:105 frame:1 start:TTG stop:TGA | |
318 TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAG | |
319 CAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTT | |
320 >puc18_ORF.10 [3798-4023](+) type:complete length:225 frame:1 start:TTG stop:TAA | |
321 TTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGC | |
322 TCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAG | |
323 CTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTA | |
324 TGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCG | |
325 >puc18_ORF.11 [4041-4146](+) type:complete length:105 frame:1 start:CTG stop:TAA | |
326 CTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGC | |
327 CCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTT | |
328 >puc18_ORF.12 [31-142](+) type:complete length:111 frame:2 start:CTG stop:TAA | |
329 CTGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTAAGCGGATGCCGGGAGCAGAC | |
330 AAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTGGCT | |
331 >puc18_ORF.13 [208-550](+) type:complete length:342 frame:2 start:ATG stop:TAA | |
332 ATGCGTAAGGAGAAAATACCGCATCAGGCGGCAATGGCAACAACGTTGCGCAAACTATTAAC | |
333 TGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAG | |
334 TTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA | |
335 GCCGGTGAGCGTGGATCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCG | |
336 TATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCG | |
337 CTGAGATAGGTGCCTCACTGATTAAGCATTGG | |
338 >puc18_ORF.14 [1207-2086](+) type:complete length:879 frame:2 start:TTG stop:TAG | |
339 TTGTGGGACGCAGATACAGTGTCCCCTTATACACAAGGAATGTCGAACGTGGCCTCACCCCC | |
340 AATGGTTTACAAAAGCAATGCCCTGGTCGAGGCCGCGTATCGCCTCAGTGTTCAGGAACAGC | |
341 GGATCGTTCTGGCCTGTATTAGCCAGGTGAAGAGGAGCGAGCCTGTCACCGATGAAGTGATG | |
342 TATTCAGTGACGGCGGAGGACATAGCGACGATGGCGGGTGTCCCTATCGAATCTTCCTACAA | |
343 CCAGCTCAAAGAAGCGGCCCTGCGCCTGAAACGGCGGGAAGTCCGGTTAACCCAAGAGCCCA | |
344 ATGGCAAGGGGAAAAGACCGAGTGTGATGATTACCGGCTGGGTGCAAACAATCATCTACCGG | |
345 GAGGGTGAGGGCCGTGTAGAACTCAGGTTCACCAAAGACATGCTGCCGTACCTGACGGAACT | |
346 CACCAAACAGTTCACCAAATACGCCTTGGCTGACGTGGCCAAGATGGACAGCACCCACGCGA | |
347 TCAGGCTTTACGAGCTGCTCATGCAATGGGACAGCATCGGCCAGCGCGAAATAGAAATTGAC | |
348 CAGCTGCGAAAGTGGTTTCAACTGGAAGGCCGGTATCCCTCGATCAAGGACTTCAAGTTGCG | |
349 AGTGCTTGATCCAGCCGTGACGCAGATCAACGAGCACAGCCCGCTACAGGTGGAGTGGGCGC | |
350 AGCGAAAGACCGGGCGCAAGGTCACACATCTGTTGTTCAGTTTTGGACCGAAGAAGCCCGCC | |
351 AAGGCGGTGGGTAAGGCCCCAGCGAAGCGCAAGGCCGGGAAGATTTCAGATGCTGAGATCGC | |
352 GAAACAGGCTCGCCCTGGTGAGACATGGGAAGCGGCCCGCGCTCGACTAACCCAGATGCCGC | |
353 TGGATCTGGCC | |
354 >puc18_ORF.15 [2113-2410](+) type:complete length:297 frame:2 start:CTG stop:TAA | |
355 CTGCCTTTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACG | |
356 CCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCC | |
357 AGTCACGACGTTGTAAAACGACGGCCAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGA | |
358 GGATCCCCGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATT | |
359 GTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTG | |
360 >puc18_ORF.16 [2416-2575](+) type:complete length:159 frame:2 start:CTG stop:TGA | |
361 CTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCC | |
362 AGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGT | |
363 TTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCAC | |
364 >puc18_ORF.17 [2761-2932](+) type:5-prime-partial length:171 frame:2 start:NA stop:TAG | |
365 CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT | |
366 ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACC | |
367 GGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA | |
368 >puc18_ORF.18 [3535-3742](+) type:complete length:207 frame:2 start:CTG stop:TAA | |
369 CTGTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGG | |
370 AGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCA | |
371 GATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTT | |
372 ATCCGCCTCCATCCAGTCTAT | |
373 >puc18_ORF.19 [4246-4423](+) type:complete length:177 frame:2 start:CTG stop:TGA | |
374 CTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAA | |
375 ATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTTTT | |
376 CAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATT | |
377 >puc18_ORF.20 [332-461](+) type:complete length:129 frame:3 start:TTG stop:TAG | |
378 TTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA | |
379 GCCGGTGAGCGTGGATCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCG | |
380 TATCG | |
381 >puc18_ORF.21 [770-905](+) type:complete length:135 frame:3 start:TTG stop:TGA | |
382 TTGGAAAGAAACGAGGGAAAGGGGACTGATAAACCGGTCTTAGCCCCTCCCCTTGGTGTCCA | |
383 ACCGCTCTGTAGGCCTCTCAGGCGCCGCTGGTGCCGCTGGTTGGACGCCAAGGGTGAATCCG | |
384 CCTCGATACCC | |
385 >puc18_ORF.22 [947-1097](+) type:complete length:150 frame:3 start:CTG stop:TAA | |
386 CTGGTAAAACGGGGATTGCCCAGACGCCTCCCCCGCCCCTTCAGGGGCACAAATGCGGCCCC | |
387 AACGGGGCCACGTAGTGGTGCGTTTTTTGCGTTTCCACCCTTTTCTTCCTTTTCCCTTTTAA | |
388 ACCTTTTAGGACGTCTACAGGCCACG | |
389 >puc18_ORF.23 [1133-1358](+) type:complete length:225 frame:3 start:TTG stop:TGA | |
390 TTGTTGCCATTAAGGGACGGATTTGTTGTTAAGAAGGGACGGATTTGTTGTTGTAAAGGGAC | |
391 GGATTTGTTGTATTGTGGGACGCAGATACAGTGTCCCCTTATACACAAGGAATGTCGAACGT | |
392 GGCCTCACCCCCAATGGTTTACAAAAGCAATGCCCTGGTCGAGGCCGCGTATCGCCTCAGTG | |
393 TTCAGGAACAGCGGATCGTTCTGGCCTGTATTAGCCAGG | |
394 >puc18_ORF.24 [1931-2060](+) type:complete length:129 frame:3 start:TTG stop:TAA | |
395 TTGGACCGAAGAAGCCCGCCAAGGCGGTGGGTAAGGCCCCAGCGAAGCGCAAGGCCGGGAAG | |
396 ATTTCAGATGCTGAGATCGCGAAACAGGCTCGCCCTGGTGAGACATGGGAAGCGGCCCGCGC | |
397 TCGAC | |
398 >puc18_ORF.25 [2540-2681](+) type:complete length:141 frame:3 start:TTG stop:TGA | |
399 TTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCT | |
400 GCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA | |
401 ACGCAGGAAAGAACATG | |
402 >puc18_ORF.26 [2981-3242](+) type:complete length:261 frame:3 start:CTG stop:TGA | |
403 CTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG | |
404 TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA | |
405 TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGC | |
406 TACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG | |
407 AGTTGGTAGCTCT | |
408 >puc18_ORF.27 [3626-3890](+) type:complete length:264 frame:3 start:ATG stop:TGA | |
409 ATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGG | |
410 AAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTT | |
411 GCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCT | |
412 ACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACG | |
413 ATCAAGGCGAGTTACA | |
414 >puc18_ORF.28 [3899-4067](+) type:complete length:168 frame:3 start:ATG stop:TGA | |
415 ATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGC | |
416 CGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCG | |
417 TAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTC | |
418 >puc18_ORF.29 [4079-4226](+) type:complete length:147 frame:3 start:ATG stop:TAA | |
419 ATGCGGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAG | |
420 AACTTTAAAAGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTAC | |
421 CGCTGTTGAGATCCAGTTCGATG | |
422 >puc18_ORF.30 [3588-3717](-) type:complete length:129 frame:-1 start:TTG stop:TAG | |
423 TTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA | |
424 GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCG | |
425 TATCG | |
426 >puc18_ORF.31 [2955-3090](-) type:complete length:135 frame:-1 start:CTG stop:TGA | |
427 CTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGAT | |
428 AAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGAC | |
429 CTACACCGAAC | |
430 >puc18_ORF.32 [2574-2811](-) type:complete length:237 frame:-1 start:CTG stop:TGA | |
431 CTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGG | |
432 AGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTT | |
433 TGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTG | |
434 AGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAG | |
435 >puc18_ORF.33 [2088-2340](-) type:complete length:252 frame:-1 start:ATG stop:TAG | |
436 ATGACCATGATTACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA | |
437 TGCAAGCTTGGCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCC | |
438 AACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGC | |
439 ACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAAAGGCAGGCCGGGCCGTGGTGGCCACGG | |
440 CCTC | |
441 >puc18_ORF.34 [1785-1983](-) type:complete length:198 frame:-1 start:TTG stop:TGA | |
442 TTGCGCTTCGCTGGGGCCTTACCCACCGCCTTGGCGGGCTTCTTCGGTCCAAAACTGAACAA | |
443 CAGATGTGTGACCTTGCGCCCGGTCTTTCGCTGCGCCCACTCCACCTGTAGCGGGCTGTGCT | |
444 CGTTGATCTGCGTCACGGCTGGATCAAGCACTCGCAACTTGAAGTCCTTGATCGAGGGATAC | |
445 CGGCCTTCCAGT | |
446 >puc18_ORF.35 [1575-1707](-) type:complete length:132 frame:-1 start:CTG stop:TAG | |
447 CTGATCGCGTGGGTGCTGTCCATCTTGGCCACGTCAGCCAAGGCGTATTTGGTGAACTGTTT | |
448 GGTGAGTTCCGTCAGGTACGGCAGCATGTCTTTGGTGAACCTGAGTTCTACACGGCCCTCAC | |
449 CCTCCCGG | |
450 >puc18_ORF.36 [1452-1572](-) type:complete length:120 frame:-1 start:ATG stop:TAG | |
451 ATGATTGTTTGCACCCAGCCGGTAATCATCACACTCGGTCTTTTCCCCTTGCCATTGGGCTC | |
452 TTGGGTTAACCGGACTTCCCGCCGTTTCAGGCGCAGGGCCGCTTCTTTGAGCTGGTTG | |
453 >puc18_ORF.37 [990-1143](-) type:complete length:153 frame:-1 start:ATG stop:TGA | |
454 ATGGCAACAAATCCGTCCCTTTTTAAACTCTACAGGCCACGGATTACGTGGCCTGTAGACGT | |
455 CCTAAAAGGTTTAAAAGGGAAAAGGAAGAAAAGGGTGGAAACGCAAAAAACGCACCACTACG | |
456 TGGCCCCGTTGGGGCCGCATTTGTGCCCC | |
457 >puc18_ORF.38 [234-423](-) type:complete length:189 frame:-1 start:ATG stop:TGA | |
458 ATGATACCGCGAGATCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGG | |
459 AAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTT | |
460 GCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCC | |
461 GCC | |
462 >puc18_ORF.39 [4256-4448](-) type:complete length:192 frame:-2 start:TTG stop:TGA | |
463 TTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAA | |
464 TGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT | |
465 CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAA | |
466 AGATGC | |
467 >puc18_ORF.40 [3074-3365](-) type:complete length:291 frame:-2 start:CTG stop:TAA | |
468 CTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCG | |
469 TAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAA | |
470 GAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGT | |
471 CCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACC | |
472 TCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGA | |
473 >puc18_ORF.41 [2816-2933](-) type:complete length:117 frame:-2 start:ATG stop:TAG | |
474 ATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGG | |
475 TCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTA | |
476 >puc18_ORF.42 [2657-2768](-) type:complete length:111 frame:-2 start:ATG stop:TGA | |
477 ATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCC | |
478 TGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCC | |
479 >puc18_ORF.43 [2339-2447](-) type:5-prime-partial length:108 frame:-2 start:NA stop:TGA | |
480 TGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGT | |
481 TGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTA | |
482 >puc18_ORF.44 [2123-2279](-) type:complete length:156 frame:-2 start:ATG stop:TGA | |
483 ATGCAAGCTTGGCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACC | |
484 CAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCG | |
485 CACCGATCGCCCTTCCCAACAGTTGCGCAGCC | |
486 >puc18_ORF.45 [1928-2039](-) type:complete length:111 frame:-2 start:ATG stop:TGA | |
487 ATGTCTCACCAGGGCGAGCCTGTTTCGCGATCTCAGCATCTGAAATCTTCCCGGCCTTGCGC | |
488 TTCGCTGGGGCCTTACCCACCGCCTTGGCGGGCTTCTTCGGTCCAAAAC | |
489 >puc18_ORF.46 [1145-1271](-) type:complete length:126 frame:-2 start:TTG stop:TAA | |
490 TTGGGGGTGAGGCCACGTTCGACATTCCTTGTGTATAAGGGGACACTGTATCTGCGTCCCAC | |
491 AATACAACAAATCCGTCCCTTTACAACAACAAATCCGTCCCTTCTTAACAACAAATCCGTCC | |
492 CT | |
493 >puc18_ORF.47 [932-1067](-) type:5-prime-partial length:135 frame:-2 start:NA stop:TGA | |
494 AAGGGAAAAGGAAGAAAAGGGTGGAAACGCAAAAAACGCACCACTACGTGGCCCCGTTGGGG | |
495 CCGCATTTGTGCCCCTGAAGGGGCGGGGGAGGCGTCTGGGCAATCCCCGTTTTACCAGTCCC | |
496 CTATCGCCGCC | |
497 >puc18_ORF.48 [3499-4357](-) type:complete length:858 frame:-3 start:ATG stop:TAA | |
498 ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGT | |
499 TTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAG | |
500 TGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA | |
501 CGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGA | |
502 CGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACT | |
503 CACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC | |
504 ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGA | |
505 GCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGG | |
506 AGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA | |
507 ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGA | |
508 CTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGT | |
509 TTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG | |
510 CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGA | |
511 TGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG | |
512 >puc18_ORF.49 [3169-3310](-) type:complete length:141 frame:-3 start:CTG stop:TAG | |
513 CTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCC | |
514 GGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAA | |
515 ATACTGTCCTTCTAGTG | |
516 >puc18_ORF.50 [2791-2929](-) type:5-prime-partial length:138 frame:-3 start:NA stop:TGA | |
517 GAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGG | |
518 AACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCG | |
519 GGTTTCGCCACCTC | |
520 >puc18_ORF.51 [2509-2620](-) type:5-prime-partial length:111 frame:-3 start:NA stop:TAA | |
521 GCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGA | |
522 AGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCAT | |
523 >puc18_ORF.52 [1504-1852](-) type:complete length:348 frame:-3 start:CTG stop:TAA | |
524 CTGCGTCACGGCTGGATCAAGCACTCGCAACTTGAAGTCCTTGATCGAGGGATACCGGCCTT | |
525 CCAGTTGAAACCACTTTCGCAGCTGGTCAATTTCTATTTCGCGCTGGCCGATGCTGTCCCAT | |
526 TGCATGAGCAGCTCGTAAAGCCTGATCGCGTGGGTGCTGTCCATCTTGGCCACGTCAGCCAA | |
527 GGCGTATTTGGTGAACTGTTTGGTGAGTTCCGTCAGGTACGGCAGCATGTCTTTGGTGAACC | |
528 TGAGTTCTACACGGCCCTCACCCTCCCGGTAGATGATTGTTTGCACCCAGCCGGTAATCATC | |
529 ACACTCGGTCTTTTCCCCTTGCCATTGGGCTCTTGGGT | |
530 >puc18_ORF.53 [1120-1243](-) type:complete length:123 frame:-3 start:TTG stop:TAA | |
531 TTGTGTATAAGGGGACACTGTATCTGCGTCCCACAATACAACAAATCCGTCCCTTTACAACA | |
532 ACAAATCCGTCCCTTCTTAACAACAAATCCGTCCCTTAATGGCAACAAATCCGTCCCTTTT | |
533 >puc18_ORF.54 [694-991](-) type:complete length:297 frame:-3 start:CTG stop:TGA | |
534 CTGAAGGGGCGGGGGAGGCGTCTGGGCAATCCCCGTTTTACCAGTCCCCTATCGCCGCCTGA | |
535 GAGGGCGCAGGAAGCGAGTAATCAGGGTATCGAGGCGGATTCACCCTTGGCGTCCAACCAGC | |
536 GGCACCAGCGGCGCCTGAGAGGCCTACAGAGCGGTTGGACACCAAGGGGAGGGGCTAAGACC | |
537 GGTTTATCAGTCCCCTTTCCCTCGTTTCTTTCCAACGCGATAGCCCAGCAAGGCCGCCACCG | |
538 TTGCCACCGTCACCCCAGCAAGCACAGCCAGTGGCGTGTAATTGGGGTC | |
539 >puc18_ORF.55 [307-514](-) type:complete length:207 frame:-3 start:CTG stop:TAA | |
540 CTGTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGG | |
541 AGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGATCCACGCTCACCGGCTCCA | |
542 GATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTT | |
543 ATCCGCCTCCATCCAGTCTAT |