Mercurial > repos > iuc > orthofinder_onlygroups
view test-data/results_fromblast/Statistics_Overall.csv @ 3:1aed170afb2b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/orthofinder commit c39323361ef6ba2664646e4476736c80bcd01124"
| author | iuc |
|---|---|
| date | Wed, 18 Dec 2019 15:24:46 -0500 |
| parents | bfb20dbe1309 |
| children |
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Number of genes 2733 Number of genes in orthogroups 1938 Number of unassigned genes 795 Percentage of genes in orthogroups 70.9 Percentage of unassigned genes 29.1 Number of orthogroups 536 Number of species-specific orthogroups 6 Number of genes in species-specific orthogroups 100 Percentage of genes in species-specific orthogroups 3.7 Mean orthogroup size 3.6 Median orthogroup size 4.0 G50 (assigned genes) 4 G50 (all genes) 4 O50 (assigned genes) 199 O50 (all genes) 299 Number of orthogroups with all species present 278 Number of single-copy orthogroups 254 Date 2017-06-08 Orthogroups file Orthogroups.csv Unassigned genes file Orthogroups_UnassignedGenes.csv Per-species statistics Statistics_PerSpecies.csv Overall statistics Statistics_Overall.csv Orthogroups shared between species Orthogroups_SpeciesOverlaps.csv Average number of genes per-species in orthogroup Number of orthogroups Percentage of orthogroups Number of genes Percentage of genes <1 224 41.8 516 26.6 '1 302 56.3 1254 64.7 '2 7 1.3 65 3.4 '3 0 0.0 0 0.0 '4 0 0.0 0 0.0 '5 1 0.2 20 1.0 '6 1 0.2 27 1.4 '7 0 0.0 0 0.0 '8 0 0.0 0 0.0 '9 0 0.0 0 0.0 '10 0 0.0 0 0.0 11-15 1 0.2 56 2.9 16-20 0 0.0 0 0.0 21-50 0 0.0 0 0.0 51-100 0 0.0 0 0.0 101-150 0 0.0 0 0.0 151-200 0 0.0 0 0.0 201-500 0 0.0 0 0.0 501-1000 0 0.0 0 0.0 '1001+ 0 0.0 0 0.0 Number of species in orthogroup Number of orthogroups 1 6 2 177 3 75 4 278