Mercurial > repos > iuc > orthofinder_onlygroups
view test-data/results/Statistics_Overall.csv @ 5:974d8c28e586 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/orthofinder commit 8fb4e5b2821a83fda89ac616b32726714962717c"
| author | iuc |
|---|---|
| date | Mon, 17 Aug 2020 12:59:19 -0400 |
| parents | bfb20dbe1309 |
| children |
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Number of genes 2733 Number of genes in orthogroups 1938 Number of unassigned genes 795 Percentage of genes in orthogroups 70.9 Percentage of unassigned genes 29.1 Number of orthogroups 536 Number of species-specific orthogroups 6 Number of genes in species-specific orthogroups 97 Percentage of genes in species-specific orthogroups 3.5 Mean orthogroup size 3.6 Median orthogroup size 4.0 G50 (assigned genes) 4 G50 (all genes) 4 O50 (assigned genes) 200 O50 (all genes) 299 Number of orthogroups with all species present 280 Number of single-copy orthogroups 254 Date 2017-06-06 Orthogroups file Orthogroups.csv Unassigned genes file Orthogroups_UnassignedGenes.csv Per-species statistics Statistics_PerSpecies.csv Overall statistics Statistics_Overall.csv Orthogroups shared between species Orthogroups_SpeciesOverlaps.csv Average number of genes per-species in orthogroup Number of orthogroups Percentage of orthogroups Number of genes Percentage of genes <1 222 41.4 510 26.3 '1 304 56.7 1270 65.5 '2 8 1.5 75 3.9 '3 0 0.0 0 0.0 '4 0 0.0 0 0.0 '5 0 0.0 0 0.0 '6 1 0.2 27 1.4 '7 0 0.0 0 0.0 '8 0 0.0 0 0.0 '9 0 0.0 0 0.0 '10 0 0.0 0 0.0 11-15 1 0.2 56 2.9 16-20 0 0.0 0 0.0 21-50 0 0.0 0 0.0 51-100 0 0.0 0 0.0 101-150 0 0.0 0 0.0 151-200 0 0.0 0 0.0 201-500 0 0.0 0 0.0 501-1000 0 0.0 0 0.0 '1001+ 0 0.0 0 0.0 Number of species in orthogroup Number of orthogroups 1 6 2 172 3 78 4 280