Mercurial > repos > iuc > package_blast_plus_2_5_0
changeset 1:5dd2b68c7d04 draft default tip
planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/packages/package_blast_plus_2_5_0/ commit 5e6ab3f9d02834b8be7cb93aced77956c51cdecc
| author | peterjc |
|---|---|
| date | Fri, 02 Dec 2016 06:37:12 -0500 |
| parents | d4f310163b85 |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 4 insertions(+), 13 deletions(-) [+] |
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--- a/tool_dependencies.xml Fri Dec 02 05:25:28 2016 -0500 +++ b/tool_dependencies.xml Fri Dec 02 06:37:12 2016 -0500 @@ -5,22 +5,13 @@ <actions_group> <!-- Download the binaries for BLAST+ compatible with 64-bit OSX. --> <actions os="darwin" architecture="x86_64"> - <!-- Original URL ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.5.0/ncbi-blast-2.5.0+-universal-macosx.tar.gz --> - <action type="download_by_url" sha256sum="a446a18eec900cfd821a754bd984f6fe7076341801ece5ca40cbcddde7d0ca72" target_filename="ncbi-blast-2.5.0+-universal-macosx.tar.gz">https://depot.galaxyproject.org/software/blast_plus/blast_plus_2.5.0_darwin_all.tar.gz</action> + <!-- Original URL ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.5.0/ncbi-blast-2.5.0+-x64-macosx.tar.gz --> + <action type="download_by_url" sha256sum="a446a18eec900cfd821a754bd984f6fe7076341801ece5ca40cbcddde7d0ca72" target_filename="ncbi-blast-2.5.0+-x64-macosx.tar.gz">https://depot.galaxyproject.org/software/blast_plus/blast_plus_2.5.0_darwin_x64.tar.gz</action> <action type="move_directory_files"> <source_directory>bin</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> </actions> - <!-- Download the binaries for BLAST+ compatible with 32-bit OSX. --> - <actions os="darwin" architecture="i386"> - <!-- Original URL ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.5.0/ncbi-blast-2.5.0+-universal-macosx.tar.gz --> - <action type="download_by_url" sha256sum="a446a18eec900cfd821a754bd984f6fe7076341801ece5ca40cbcddde7d0ca72" target_filename="ncbi-blast-2.5.0+-universal-macosx.tar.gz">https://depot.galaxyproject.org/software/blast_plus/blast_plus_2.5.0_darwin_all.tar.gz</action> - <action type="move_directory_files"> - <source_directory>bin</source_directory> - <destination_directory>$INSTALL_DIR</destination_directory> - </action> - </actions> <!-- Download the binaries for BLAST+ compatible with 64-bit Linux. --> <actions os="linux" architecture="x86_64"> <!-- Original URL ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.5.0/ncbi-blast-2.5.0+-x64-linux.tar.gz --> @@ -31,7 +22,7 @@ </action> </actions> <actions> - <action type="shell_command">echo "ERROR: Automated installation on your operating system and CPU architecture combination is not yet supported."</action> + <action type="shell_command">echo "ERROR: Automated installation on your operating system and CPU architecture combination is not supported."</action> <action type="shell_command">echo "Your machine details (the output from 'uname' and 'arch'):"</action> <action type="shell_command">uname</action> <action type="shell_command">arch</action> @@ -52,7 +43,7 @@ dependencies, and is more reproducible between installations as there is no variability from the compiler or library versions. -Note that NCBI do not provide 32 bit Linux binaries anymore. +Note that NCBI do not provide any 32 bit binaries anymore. For more details, see: http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download