Mercurial > repos > iuc > package_bx_python_0_7
changeset 0:7ce9cf37130f draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bx_python_0_7 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author | iuc |
---|---|
date | Tue, 19 May 2015 14:57:32 -0400 |
parents | |
children | |
files | tool_dependencies.xml |
diffstat | 1 files changed, 32 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue May 19 14:57:32 2015 -0400 @@ -0,0 +1,32 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="numpy" version="1.7.1"> + <repository changeset_revision="c7ae57300a77" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + </package> + <package name="bx-python" version="0.7.1"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://pypi.python.org/packages/source/b/bx-python/bx-python-0.7.1.tar.gz</action> + + <action type="set_environment_for_install"> + <repository changeset_revision="c7ae57300a77" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> + <package name="numpy" version="1.7.1" /> + </repository> + </action> + + <action type="make_directory">$INSTALL_DIR/lib/python</action> + <action type="shell_command"> + export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && + python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action> + <action type="set_environment"> + <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> + <environment_variable action="set_to" name="BX_PYTHON_PATH">$INSTALL_DIR</environment_variable> + </action> + </actions> + </install> + <readme> + Installation of bx-python. The installation can be accessed via BX_PYTHON_PATH. + </readme> + </package> +</tool_dependency>