annotate tool_dependencies.xml @ 5:af4887e1f595 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bzlib_1_0 commit b506753c5a6c755d070d36eab553e79692b2f232

 <tool_dependency>
    <package name="bzlib" version="1.0.6">
        <install version="1.0">
            <actions_group>
                <actions os="linux" architecture="x86_64">
                    <!-- first action is always downloading -->
                    <action type="download_by_url">http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz</action>
                    <action type="shell_command">
                        <![CDATA[
                            make -f Makefile-libbz2_so &&
                            make &&
                            make install PREFIX=$INSTALL_DIR/bzlib &&
                            cp bzip2-shared $INSTALL_DIR/bzlib/bin/bzip2 &&
                            cp -a libbz2.so* $INSTALL_DIR/bzlib/lib &&
                            ln -s libbz2.so.1.0 $INSTALL_DIR/bzlib/lib/libbz2.so
                        ]]>
                    </action>
                    <action type="move_directory_files">
                        <source_directory>./</source_directory>
                        <destination_directory>$INSTALL_DIR/bzlib/source</destination_directory>
                    </action>
                </actions>
                <actions>
                    <!-- This actions tag is processed for all platforms besides Linux x86_64. -->
                    <action type="download_by_url">http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz</action>
                    <action type="shell_command">
                        <![CDATA[
                            make &&
                            make install PREFIX=$INSTALL_DIR/bzlib
                        ]]>
                    </action>
                     <action type="move_directory_files">
                        <source_directory>./</source_directory>
                        <destination_directory>$INSTALL_DIR/bzlib/source</destination_directory>
                    </action>
                </actions>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bzlib/bin</environment_variable>
                    <environment_variable name="BZLIB_LIB_DIR" action="set_to">$INSTALL_DIR/bzlib/lib</environment_variable>
                    <environment_variable name="BZLIB_INCLUDE_DIR" action="set_to">$INSTALL_DIR/bzlib/include</environment_variable>
                    <environment_variable name="BZLIB_SOURCE_DIR" action="set_to">$INSTALL_DIR/bzlib/source</environment_variable>
                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/lib</environment_variable>
                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/source</environment_variable>
                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/lib</environment_variable>
                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/source</environment_variable>
                    <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/bzlib/include</environment_variable>
                    <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/bzlib/include</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>Compiling bzlib requires make and a C compiler. You can access bzlib with $BZLIB_LIB_DIR and $BZLIB_INCLUDE_DIR.</readme>
    </package>
</tool_dependency>