Mercurial > repos > iuc > package_deseq2_1_10_0

comparison tool_dependencies.xml @ 4:e4a11a7d33d6 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_10_0 commit 0749a020053d3774684bd72efb9b8b6e9efcf351
author iuc
date Fri, 13 May 2016 05:24:11 -0400
parents 2262bf4fa268
children
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3:2262bf4fa268 4:e4a11a7d33d6
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="R" version="3.2.1"> 3 <package name="R" version="3.2.1">
4 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="libxml2" version="2.9.1"> 6 <package name="libxml2" version="2.9.1">
7 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="deseq2" version="1.10.0"> 9 <package name="deseq2" version="1.10.0">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action type="setup_r_environment"> 12 <action type="setup_r_environment">
13 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 13 <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
14 <package name="R" version="3.2.1" /> 14 <package name="R" version="3.2.1" />
15 </repository> 15 </repository>
16 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 --> 16 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
17 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
18 <package name="libxml2" version="2.9.1" /> 18 <package name="libxml2" version="2.9.1" />
27 https://bioarchive.galaxyproject.org/IRanges_2.5.0.tar.gz 27 https://bioarchive.galaxyproject.org/IRanges_2.5.0.tar.gz
28 </package> 28 </package>
29 <package sha256sum="3d4ff22c6a11192ee1e313042ff0da4703b18c72f2247be73a0590769328d05a"> 29 <package sha256sum="3d4ff22c6a11192ee1e313042ff0da4703b18c72f2247be73a0590769328d05a">
30 https://depot.galaxyproject.org/software/GenomeInfoDb/GenomeInfoDb_1.4.2_src_all.tar.gz 30 https://depot.galaxyproject.org/software/GenomeInfoDb/GenomeInfoDb_1.4.2_src_all.tar.gz
31 </package> 31 </package>
32 <package sha256sum="64ca661349d7e25d8f2363901fa452b55d05780913025a5856a7b635166c1925"> 32 <package sha256sum="a63298f7a2527204fe6014e1d68e54de6bc9738c94f2b51721a05fb6f2db7311">
33 https://depot.galaxyproject.org/software/XVector/XVector_0.8.0_src_all.tar.gz 33 https://bioarchive.galaxyproject.org/zlibbioc_1.16.0.tar.gz
34 </package>
35 <package sha256sum="2d5ff65783d152a69825cb6f7dc37ad483e5186d60830f2254f20c0eaf282c7e">
36 https://bioarchive.galaxyproject.org/XVector_0.10.0.tar.gz
34 </package> 37 </package>
35 <package sha256sum="7248c1113d799a2c37f73d0913e714ea443301bd95be664a1b799910145706c1"> 38 <package sha256sum="7248c1113d799a2c37f73d0913e714ea443301bd95be664a1b799910145706c1">
36 https://bioarchive.galaxyproject.org/GenomicRanges_1.23.0.tar.gz 39 https://bioarchive.galaxyproject.org/GenomicRanges_1.23.0.tar.gz
37 </package> 40 </package>
38 <package sha256sum="68782050f5252c4246f1b5b335105eccf4c804d57a0cd41eb63a300f7e0241a0"> 41 <package sha256sum="68782050f5252c4246f1b5b335105eccf4c804d57a0cd41eb63a300f7e0241a0">