Mercurial > repos > iuc > package_galaxy_sequence_utils_1_0_1

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
author iuc
date Wed, 16 Dec 2015 14:27:30 -0500
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c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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1 <?xml version="1.0"?>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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2 <tool_dependency>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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3 <package name="galaxy_sequence_utils" version="1.0.1">
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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4 <install version="1.0">
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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5 <actions>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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6 <action type="download_by_url">http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz</action>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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8 <action type="shell_command">
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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9 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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10 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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11 </action>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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12 <action type="set_environment">
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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13 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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14 <environment_variable name="GALAXY_SEQUENCE_UTILS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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15 </action>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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16 </actions>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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17 </install>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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18 <readme>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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19 </readme>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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20 </package>
c1ab450748ba planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_galaxy_sequence_utils_1_0_1 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9
iuc
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21 </tool_dependency>