Mercurial > repos > iuc > package_genometools_1_5_7
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_genometools_1_5_7 commit ef70edc74e958c32231f632339da032403d2a55a
author | iuc |
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date | Tue, 26 Jan 2016 15:01:23 -0500 |
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<?xml version="1.0"?> <tool_dependency> <package name="genometools" version="1.5.7"> <install version="1.0"> <actions> <action type="download_by_url" sha256sum="b84a2eab9e7b8fb3e7acb5a1b9df40e8d07394d18357b4bb85c5a9004f3339e5"> https://depot.galaxyproject.org/software/genometools/genometools_1.5.7_src_all.tar.gz </action> <action type="shell_command">make 64bit=yes cairo=no prefix=$INSTALL_DIR install</action> <action type="make_directory">$INSTALL_DIR/lib/python</action> <action type="shell_command">cd gtpython && python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action> <action type="set_environment"> <environment_variable action="set_to" name="GENOMETOOLS_ROOT_DIR">$INSTALL_DIR</environment_variable> <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> The GenomeTools genome analysis system is a collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt. It is based on a C library named “libgenometools” which consists of several modules. For more details, see: http://genometools.org/ </readme> </package> </tool_dependency>