Mercurial > repos > iuc > package_labels_1_0_5

changeset 0:b38bd896aae0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_labels_1_0_5 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author iuc
date Tue, 19 May 2015 14:59:09 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 31 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue May 19 14:59:09 2015 -0400
@@ -0,0 +1,31 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="pysam" version="0.7.7">
+        <repository changeset_revision="b62538c8c664" name="package_pysam_0_7_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="labels" version="1.0.5">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://pypi.python.org/packages/source/l/lapels/lapels-1.0.5.tar.gz</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="b62538c8c664" name="package_pysam_0_7_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="pysam" version="0.7.7" />
+                    </repository>
+                </action>
+                <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                <action type="shell_command">
+                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
+                    python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYSAM_PATH]/lib/python</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$ENV[PYSAM_PATH]</environment_variable>
+                    <environment_variable action="set_to" name="PYTHONPATH_LABELS">$INSTALL_DIR/lib/python</environment_variable>
+                    </action>
+            </actions>
+        </install>
+        <readme>The PYTHONPATH for labels can be accessed through PYTHONPATH_LABELS.</readme>
+    </package>
+</tool_dependency>