comparison tool_dependencies.xml @ 1:9ddc606546c3 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_mummer_3_23 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty

0:cc6c4d6ebceb

                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
http://mummer.sourceforge.net/
MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it can easily handle the 100s or 1000s of contigs from a shotgun sequencing project, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for a DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences. 
        </readme>
    </package>
</tool_dependency>

1:9ddc606546c3

                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. 
For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds,
using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it can easily handle the 100s or 1000s
of contigs from a shotgun sequencing project, and will align them to another set of contigs or a genome using the NUCmer program included with the system.
If the species are too divergent for a DNA sequence alignment to detect similarity, then the PROmer program can generate
alignments based upon the six-frame translations of both input sequences. 

http://mummer.sourceforge.net/
        </readme>
    </package>
</tool_dependency>