comparison tool_dependencies.xml @ 1:e5ef70185d24 draft

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author bgruening
date Sun, 20 Apr 2014 17:39:23 -0400
parents 99a10425de93
children ae369c08a2a7
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0:99a10425de93 1:e5ef70185d24
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="eigen3" version="3.1.3"> 3 <package name="eigen3" version="3.1.3">
4 <repository changeset_revision="6a1c187f36aa" name="package_eigen_3_1" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="b8ed0e76f501" name="package_eigen_3_1" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="openbabel" version="2.3.2"> 6 <package name="openbabel" version="2.3.2">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions> 8 <actions>
9 <action type="download_by_url">http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz</action> 9 <action type="download_by_url">http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz</action>
10 10
11 <!-- populate the environment variables from the dependend repos --> 11 <!-- populate the environment variables from the dependend repos -->
12 <action type="set_environment_for_install"> 12 <action type="set_environment_for_install">
13 <repository changeset_revision="6a1c187f36aa" name="package_eigen_3_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> 13 <repository changeset_revision="b8ed0e76f501" name="package_eigen_3_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
14 <package name="eigen3" version="3.1.3" /> 14 <package name="eigen3" version="3.1.3" />
15 </repository> 15 </repository>
16 </action> 16 </action>
17 17
18 <!-- 18 <!--
28 <environment_variable action="set_to" name="BABEL_DATADIR">$INSTALL_DIR/share/openbabel</environment_variable> 28 <environment_variable action="set_to" name="BABEL_DATADIR">$INSTALL_DIR/share/openbabel</environment_variable>
29 <environment_variable action="set_to" name="BABEL_LIBDIR">$INSTALL_DIR/lib/openbabel/2.3.2</environment_variable> 29 <environment_variable action="set_to" name="BABEL_LIBDIR">$INSTALL_DIR/lib/openbabel/2.3.2</environment_variable>
30 <!-- galaxy variables for other tool wrappers --> 30 <!-- galaxy variables for other tool wrappers -->
31 <environment_variable action="set_to" name="OPENBABEL_LIB_DIR">$INSTALL_DIR/lib</environment_variable> 31 <environment_variable action="set_to" name="OPENBABEL_LIB_DIR">$INSTALL_DIR/lib</environment_variable>
32 <environment_variable action="set_to" name="OPENBABEL_INCLUDE_DIR">$INSTALL_DIR/include</environment_variable> 32 <environment_variable action="set_to" name="OPENBABEL_INCLUDE_DIR">$INSTALL_DIR/include</environment_variable>
33 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/</environment_variable>
34 <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
35 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
33 </action> 36 </action>
34 </actions> 37 </actions>
35 </install> 38 </install>
36 <readme>Compiling OpenBabel requires g++ and CMake 2.4+. Optional but required for a few features are the cairo development libraries. OPENBABEL_INCLUDE_DIR and OPENBABEL_LIB_DIR can be accessed from other tool wrappers.</readme> 39 <readme>Compiling OpenBabel requires g++ and CMake 2.4+. Optional but required for a few features are the cairo development libraries. OPENBABEL_INCLUDE_DIR and OPENBABEL_LIB_DIR can be accessed from other tool wrappers.</readme>
37 </package> 40 </package>