Mercurial > repos > iuc > package_perl_5_18
changeset 6:03f5951a9855 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_5_18 commit 1486cf95ee83c1c8769d1f8a80fe9342d50fc6da
author | iuc |
---|---|
date | Fri, 26 Feb 2016 03:08:35 -0500 |
parents | d905bb415eca |
children | 35f117d7396b |
files | tool_dependencies.xml |
diffstat | 1 files changed, 3 insertions(+), 9 deletions(-) [+] |
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line diff
--- a/tool_dependencies.xml Sun Feb 14 09:19:49 2016 -0500 +++ b/tool_dependencies.xml Fri Feb 26 03:08:35 2016 -0500 @@ -7,15 +7,11 @@ <install version="1.0"> <actions> <!-- install perl --> - <action sha256sum="655e11a8ffba8853efcdce568a142c232600ed120ac24aaebb4e6efe74e85b2b" type="download_by_url"> - https://depot.galaxyproject.org/software/perl/perl_5.18_src_all.tar.gz - </action> + <action sha256sum="655e11a8ffba8853efcdce568a142c232600ed120ac24aaebb4e6efe74e85b2b" type="download_by_url">https://depot.galaxyproject.org/software/perl/perl_5.18_src_all.tar.gz</action> <action type="shell_command">./Configure -des -Dprefix=$INSTALL_DIR -Dstartperl='#!/usr/bin/env perl'</action> <action type="make_install" /> <action type="change_directory">..</action> - <action sha256sum="5c69adb47ab828aa3e8b5be89b88cd49c6a0d0dae2e8b3bca17a9ce699190e7b" type="download_file"> - http://www.cpan.org/authors/id/A/AP/APEIRON/local-lib-1.008009.tar.gz - </action> + <action sha256sum="5c69adb47ab828aa3e8b5be89b88cd49c6a0d0dae2e8b3bca17a9ce699190e7b" type="download_file">http://www.cpan.org/authors/id/A/AP/APEIRON/local-lib-1.008009.tar.gz</action> <action type="shell_command">tar xfvz local-lib-1.008009.tar.gz</action> <action type="change_directory">local-lib-1.008009</action> <!-- TODO: Here we need to use the new installed perl binary --> @@ -26,9 +22,7 @@ <action type="shell_command">export PATH=$INSTALL_DIR/bin/:$PATH; eval $(perl -I$INSTALL_DIR/local-lib/lib/perl5 -Mlocal::lib=$INSTALL_DIR/local-lib)</action> <action type="change_directory">..</action> <!-- install cpanminus into our new perl environment --> - <action sha256sum="0b67f5c721259d4185bacdcbc87b835821246fe8ac7ad980d3b1a18ecdd10ff6" type="download_file"> - https://raw.github.com/miyagawa/cpanminus/c0c88f71118ecec334d62ba280e883933e7a6d39/cpanm - </action> + <action sha256sum="0b67f5c721259d4185bacdcbc87b835821246fe8ac7ad980d3b1a18ecdd10ff6" type="download_file">https://raw.github.com/miyagawa/cpanminus/c0c88f71118ecec334d62ba280e883933e7a6d39/cpanm</action> <!-- prepending means that the new install perl binary will be used after the pipe --> <action type="shell_command">if [ -d "$TMP_WORK_DIR" ] ; then export HOME=$TMP_WORK_DIR ; else export HOME=`mktemp -d` ; fi ; unset PERL_MB_OPT PERL_MM_OPT ; export PERL5LIB=$INSTALL_DIR/lib/perl5/:$PERL5LIB ; export PATH=$INSTALL_DIR/bin/:$PATH ; cat cpanm | perl - App::cpanminus</action> <action type="shell_command">LC_ALL=C sed -i.bak -e 's|#!$INSTALL_DIR/bin/|#!/usr/bin/env |' $INSTALL_DIR/bin/*</action>