annotate tool_dependencies.xml @ 0:361f7cf7a442 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
author iuc
date Thu, 18 Jun 2015 12:10:35 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
2 <tool_dependency>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
3 <package name="perl" version="5.18.1">
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
4 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
5 </package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
6 <package name="package_perl_bundle_jbrowse" version="1.0">
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
7 <install version="1.0">
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
8 <actions>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
9 <action type="setup_perl_environment">
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
10 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
11 <package name="perl" version="5.18.1" />
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
12 </repository>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
13 <!-- JSON -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
14 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/JSON-2.90.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
15 <!-- Digest::Crc32 -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
16 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Digest-Crc32-0.01.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
17 <!-- Hash::Merge -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
18 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Clone-0.38.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
19 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Hash-Merge-0.200.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
20 <!-- PerlIO::gzip -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
21 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/PerlIO-gzip-0.19.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
22 <!-- Devel::Size -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
23 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Devel-Size-0.80.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
24 <!-- Heap::Simple::XS -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
25 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Heap-Simple-0.13.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
26 <package>https://github.com/bgruening/download_store/raw/master/HeapSimpleXS/Heap-Simple-XS-0.10.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
27 <!-- List::MoreUtils -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
28 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Exporter-Tiny-0.042.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
29 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/List-MoreUtils-0.412.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
30 <!-- Exception::Class -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
31 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Class-Data-Inheritable-0.08.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
32 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Devel-StackTrace-2.00.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
33 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Exception-Class-1.39.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
34 <!-- Test::Warn -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
35 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Sub-Uplevel-0.25.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
36 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-Warn-0.30.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
37 <!-- File::Next -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
38 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/File-Next-1.12.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
39 <!-- Bio::Perl -->
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
40 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-Simple-1.001014.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
41 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Algorithm-Diff-1.1903.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
42 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-NoWarnings-1.04.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
43 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Capture-Tiny-0.30.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
44 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Text-Diff-1.41.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
45 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/IO-String-1.08.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
46 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-Deep-0.115.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
47 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-Differences-0.63.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
48 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-Exception-0.38.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
49 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Data-Stag-0.14.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
50 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/Test-Most-0.34.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
51 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/URI-1.67.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
52 <package>https://github.com/bgruening/download_store/raw/master/jbrowse/BioPerl-1.6.924.tar.gz</package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
53 </action>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
54 </actions>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
55 </install>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
56 <readme>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
57 Bundle::JBrowse (not a real bundle) installs all of the
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
58 dependencies needed for JBrowse to run.
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
59
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
60 </readme>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
61 </package>
361f7cf7a442 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_perl_bundle_jbrowse_1_0 commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
iuc
parents:
diff changeset
62 </tool_dependency>