Mercurial > repos > iuc > package_python_2_7_10_pybigwig_0_2_7

changeset 0:c11cc6035492 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_10_pybigwig_0_2_7 commit dc83f3908392f1444da623f26716eadc6967ce43
author iuc
date Fri, 18 Mar 2016 08:20:45 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 29 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Mar 18 08:20:45 2016 -0400
@@ -0,0 +1,29 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="libcurl" version="7.35">
+        <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="python" version="2.7.10">
+        <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="pybigwig" version="0.2.7">
+        <install version="1.0">
+            <actions>
+                <action type="setup_python_environment">
+                    <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="libcurl" version="7.35" />
+                    </repository>
+                    <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="python" version="2.7.10" />
+                    </repository>
+                    <!-- Just download from pypi -->
+                    <package md5sum="338c31f394923509f1c6399c49b8e033">https://pypi.python.org/packages/source/p/pyBigWig/pyBigWig-0.2.7.tar.gz</package>
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>Compiles and installs pyBigWig, which requires a compiler (typically gcc) and libcurl.</readme>
+    </package>
+</tool_dependency>