Mercurial > repos > iuc > package_rdkit_2012_12
comparison tool_dependencies.xml @ 2:842dd2fa4ace draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rdkit_2012_12 commit 710c0d73202078bd43efd595c28526ba26c8fa50-dirty
author | iuc |
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date | Sun, 01 Nov 2015 11:33:32 -0500 |
parents | 2ab9cdc5cd14 |
children |
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1:2ab9cdc5cd14 | 2:842dd2fa4ace |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <tool_dependency> | 2 <tool_dependency> |
3 <package name="numpy" version="1.7.1"> | 3 <package name="numpy" version="1.7.1"> |
4 <repository changeset_revision="74c21f9bdc39" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
5 </package> | 5 </package> |
6 <package name="boost" version="1.53.0"> | 6 <package name="boost" version="1.55.0"> |
7 <repository changeset_revision="dbdde1a2d0c5" name="package_boost_1_53" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="f0da948c5302" name="package_boost_1_55" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
8 </package> | 8 </package> |
9 | 9 |
10 <package name="rdkit" version="2012_12_1"> | 10 <package name="rdkit" version="2012_12_1"> |
11 <install version="1.0"> | 11 <install version="1.0"> |
12 <actions> | 12 <actions> |
13 <!-- first action is always downloading --> | 13 <!-- first action is always downloading --> |
14 <action type="download_by_url">http://downloads.sourceforge.net/project/rdkit/rdkit/Q4_2012/RDKit_2012_12_1.tgz</action> | 14 <action type="download_by_url">http://downloads.sourceforge.net/project/rdkit/rdkit/Q4_2012/RDKit_2012_12_1.tgz</action> |
15 | 15 |
16 <!-- populate the environment variables from the dependend repos --> | 16 <!-- populate the environment variables from the dependend repos --> |
17 <action type="set_environment_for_install"> | 17 <action type="set_environment_for_install"> |
18 <repository changeset_revision="74c21f9bdc39" name="package_numpy_1_7" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> | 18 <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
19 <package name="numpy" version="1.7.1" /> | 19 <package name="numpy" version="1.7.1" /> |
20 </repository> | 20 </repository> |
21 <repository changeset_revision="dbdde1a2d0c5" name="package_boost_1_53" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> | 21 <repository changeset_revision="f0da948c5302" name="package_boost_1_55" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
22 <package name="boost" version="1.53.0" /> | 22 <package name="boost" version="1.55.0" /> |
23 </repository> | 23 </repository> |
24 </action> | 24 </action> |
25 | 25 |
26 <!-- PYTHONPATH_NUMPY is set in the numpy package --> | 26 <!-- PYTHONPATH_NUMPY is set in the numpy package --> |
27 <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:`pwd`/lib/ && | 27 <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:`pwd`/lib/ && |