Mercurial > repos > iuc > package_samtools_0_1_19
comparison tool_dependencies.xml @ 5:923adc89c666 draft
Uploaded
| author | bgruening |
|---|---|
| date | Tue, 22 Jul 2014 12:04:37 -0400 |
| parents | 279806044d60 |
| children | 96aab723499f |
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| 4:279806044d60 | 5:923adc89c666 |
|---|---|
| 11 <actions> | 11 <actions> |
| 12 <action type="download_by_url">http://downloads.sourceforge.net/project/samtools/samtools/0.1.19/samtools-0.1.19.tar.bz2</action> | 12 <action type="download_by_url">http://downloads.sourceforge.net/project/samtools/samtools/0.1.19/samtools-0.1.19.tar.bz2</action> |
| 13 <action type="set_environment_for_install"> | 13 <action type="set_environment_for_install"> |
| 14 <repository changeset_revision="71e3f4bfd1a9" name="package_ncurses_5_9" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> | 14 <repository changeset_revision="71e3f4bfd1a9" name="package_ncurses_5_9" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> |
| 15 <package name="ncurses" version="5.9" /> | 15 <package name="ncurses" version="5.9" /> |
| 16 </repository> | |
| 17 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> | |
| 18 <package name="zlib" version="1.2.8" /> | |
| 16 </repository> | 19 </repository> |
| 17 </action> | 20 </action> |
| 18 <action type="shell_command">sed -i 's/-lcurses/-lncurses/' Makefile</action> | 21 <action type="shell_command">sed -i 's/-lcurses/-lncurses/' Makefile</action> |
| 19 <action type="shell_command">sed -i -e "s|CFLAGS=\s*-g\s*-Wall\s*-O2\s*|CFLAGS= -g -Wall -O2 -I$NCURSES_INCLUDE_PATH/ncurses/ -I$NCURSES_INCLUDE_PATH -L$NCURSES_LIB_PATH|g" Makefile</action> | 22 <action type="shell_command">sed -i -e "s|CFLAGS=\s*-g\s*-Wall\s*-O2\s*|CFLAGS= -g -Wall -O2 -I$NCURSES_INCLUDE_PATH/ncurses/ -I$NCURSES_INCLUDE_PATH -L$NCURSES_LIB_PATH|g" Makefile</action> |
| 20 <action type="shell_command">make</action> | 23 <action type="shell_command">make</action> |