Mercurial > repos > iuc > package_scikit_learn_0_13

diff tool_dependencies.xml @ 6:4229f8f239b3 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_scikit_learn_0_13 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 11:12:23 -0400
parents 2404fd8dc141
children
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--- a/tool_dependencies.xml	Wed Dec 11 12:53:36 2013 -0500
+++ b/tool_dependencies.xml	Fri Jul 17 11:12:23 2015 -0400
@@ -1,38 +1,38 @@
 <?xml version="1.0"?>
 <tool_dependency>
         <package name="numpy" version="1.7.1">
-            <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="scipy" version="0.12.0">
-            <repository changeset_revision="984d208b0808" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="cfbbe183f8a7" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="matplotlib" version="1.2.1">
-            <repository changeset_revision="dceff6072512" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="f4e53dfdd044" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="scikit_learn" version="0.13.1">
             <install version="1.0">
                 <actions>
                     <action type="download_by_url">https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.13.1.tar.gz</action>
                     <action type="set_environment_for_install">
-                        <repository changeset_revision="98a7d116c15f" name="package_lapack_3_4" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="5686c79a72d5" name="package_lapack_3_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="lapack" version="3.4.2" />
                         </repository>
-                        <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="numpy" version="1.7.1" />
                         </repository>
-                        <repository changeset_revision="984d208b0808" name="package_scipy_0_12" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="cfbbe183f8a7" name="package_scipy_0_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="scipy" version="0.12.0" />
                         </repository>
-                        <repository changeset_revision="dceff6072512" name="package_matplotlib_1_2" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="f4e53dfdd044" name="package_matplotlib_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="matplotlib" version="1.2.1" />
                         </repository>
                     </action>
 
                     <action type="make_directory">$INSTALL_DIR/lib/python</action>
                     <action language="cheetah" type="template_command">
-                    export PYTHONPATH=\$PYTHONPATH:$env.INSTALL_DIR/lib/python &amp;&amp; 
+                    export PYTHONPATH=\$PYTHONPATH:$env.INSTALL_DIR/lib/python &amp;&amp;
 
-                    export PATH=\$PATH:$env.PATH_NUMPY &amp;&amp; 
+                    export PATH=\$PATH:$env.PATH_NUMPY &amp;&amp;
                     export PYTHONPATH=\$PYTHONPATH:$env.PYTHONPATH_NUMPY:$env.PYTHONPATH_SCIPY:$env.PYTHONPATH_MATPLOTLIB &amp;&amp;
 
                     python setup.py install --install-lib $env.INSTALL_DIR/lib/python
@@ -51,9 +51,9 @@
                 </actions>
             </install>
             <readme>
-            Compiling scikit-learn requires a C compiler (typically gcc). 
+            Compiling scikit-learn requires a C compiler (typically gcc).
             The PYTHONPATH for scikit-learn can be accessed through PYTHONPATH_SCIKIT_LEARN.
-            
+
             Wrapper development: https://github.com/bgruening/galaxytools/tree/master/orphan_tool_dependencies
             </readme>
         </package>