diff tool_dependencies.xml @ 3:2c9ca7a214de draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_scikit_learn_0_15 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
author iuc
date Fri, 17 Jul 2015 11:13:14 -0400
parents a3154129061f
children
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Oct 09 06:06:09 2014 -0400
+++ b/tool_dependencies.xml	Fri Jul 17 11:13:14 2015 -0400
@@ -1,33 +1,33 @@
 <?xml version="1.0"?>
 <tool_dependency>
         <package name="numpy" version="1.9">
-            <repository changeset_revision="03eea94e534e" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="d6f39c80e75b" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="scipy" version="0.14">
-            <repository changeset_revision="36b2ca3477c2" name="package_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="d470054f3a5d" name="package_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="matplotlib" version="1.4">
-            <repository changeset_revision="fb3374b02de2" name="package_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="74be9999a120" name="package_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="scikit_learn" version="0.15">
             <install version="1.0">
                 <actions>
-                    <action type="download_by_url">https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5=d9822ad0238e17b382a3c756ea94fe0d</action>
+                    <action type="download_by_url">https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5#d9822ad0238e17b382a3c756ea94fe0d</action>
                     <action type="set_environment_for_install">
-                        <repository changeset_revision="03eea94e534e" name="package_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="d6f39c80e75b" name="package_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="numpy" version="1.9" />
                         </repository>
-                        <repository changeset_revision="36b2ca3477c2" name="package_scipy_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="d470054f3a5d" name="package_scipy_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="scipy" version="0.14" />
                         </repository>
-                        <repository changeset_revision="fb3374b02de2" name="package_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="74be9999a120" name="package_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="matplotlib" version="1.4" />
                         </repository>
                     </action>
 
                     <action type="make_directory">$INSTALL_DIR/lib/python</action>
                     <action type="template_command">
-                    export PYTHONPATH=$INSTALL_DIR/lib/python:$PYTHONPATH: &amp;&amp; 
+                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
                     python setup.py install --install-lib $INSTALL_DIR/lib/python
                     </action>
                     <action type="set_environment">
@@ -38,7 +38,6 @@
                         <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
                         <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable>
                         <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
-
                         <environment_variable action="set_to" name="PYTHONPATH_SCIKIT_LEARN">$INSTALL_DIR/lib/python</environment_variable>
                         </action>
                 </actions>