# HG changeset patch # User iuc # Date 1412846455 14400 # Node ID 25b635f2eaa5aa0cc3069457bd1a26f304588631 Imported from capsule None diff -r 000000000000 -r 25b635f2eaa5 tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Oct 09 05:20:55 2014 -0400 @@ -0,0 +1,55 @@ + + + + + + + + + + + + + + + https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5=d9822ad0238e17b382a3c756ea94fe0d + + + + + + + + + + + + $INSTALL_DIR/lib/python + + export PYTHONPATH=\$PYTHONPATH:$env.INSTALL_DIR/lib/python && + + export PATH=\$PATH:$env.PATH_NUMPY && + export PYTHONPATH=\$PYTHONPATH:$env.PYTHONPATH_NUMPY:$env.PYTHONPATH_SCIPY:$env.PYTHONPATH_MATPLOTLIB && + + python setup.py install --install-lib $env.INSTALL_DIR/lib/python + + + $INSTALL_DIR/lib/python + $INSTALL_DIR/bin + $ENV[PYTHONPATH_NUMPY] + $ENV[PATH_NUMPY] + $ENV[PYTHONPATH_SCIPY] + $ENV[PATH_SCIPY] + $ENV[PYTHONPATH_MATPLOTLIB] + $INSTALL_DIR/lib/python + + + + + Compiling scikit-learn requires a C compiler (typically gcc). + The PYTHONPATH for scikit-learn can be accessed through PYTHONPATH_SCIKIT_LEARN. + + Wrapper development: https://github.com/bgruening/galaxytools/tree/master/orphan_tool_dependencies + + +