# HG changeset patch
# User iuc
# Date 1423755504 18000
# Node ID d470054f3a5de9cea2a225a9e14e718135ada842
# Parent  36b2ca3477c29177de2d789107ddd28bd359341b
Uploaded

diff -r 36b2ca3477c2 -r d470054f3a5d tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Oct 09 05:20:54 2014 -0400
+++ b/tool_dependencies.xml	Thu Feb 12 10:38:24 2015 -0500
@@ -1,34 +1,39 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="numpy" version="1.9">
-      <repository changeset_revision="03eea94e534e" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
-    <package name="scipy" version="0.14">
-      <install version="1.0">
-          <actions>
-              <action type="download_by_url">https://pypi.python.org/packages/source/s/scipy/scipy-0.14.0.tar.gz#md5=d7c7f4ccf8b07b08d6fe49d5cd51f85d</action>
-                <action type="set_environment_for_install">
-                  <repository changeset_revision="03eea94e534e" name="package_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
-                      <package name="numpy" version="1.9" />
-                    </repository>
-                </action>
-                <action type="make_directory">$INSTALL_DIR/lib/python</action>
-                <action type="shell_command">
+        <package name="atlas" version="3.10.2">
+            <repository changeset_revision="597c0e54eded" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+        </package>
+        <package name="numpy" version="1.9">
+            <repository changeset_revision="84e97f5cd3ab" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+        </package>
+        <package name="scipy" version="0.14">
+            <install version="1.0">
+                <actions>
+                    <action type="download_by_url">https://pypi.python.org/packages/source/s/scipy/scipy-0.14.0.tar.gz#md5=d7c7f4ccf8b07b08d6fe49d5cd51f85d</action>
+                    <action type="set_environment_for_install">
+                        <repository changeset_revision="597c0e54eded" name="package_atlas_3_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                            <package name="atlas" version="3.10.2" />
+                        </repository>
+                        <repository changeset_revision="84e97f5cd3ab" name="package_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                            <package name="numpy" version="1.9" />
+                        </repository>
+                    </action>
+                    <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                    <action type="shell_command">
                         export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
-                        export PATH=$PATH:$PATH_NUMPY &amp;&amp; 
-                        export PYTHONPATH=$PYTHONPATH:$PYTHONPATH_NUMPY &amp;&amp; 
+                        export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
                         python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                     </action>
-                <action type="set_environment">
-                  <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
-                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
-                    <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
-                    <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
-                    <environment_variable action="set_to" name="PYTHONPATH_SCIPY">$INSTALL_DIR/lib/python</environment_variable>
-                    <environment_variable action="set_to" name="PATH_SCIPY">$INSTALL_DIR/bin</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>Compiling scipy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for scipy can be accessed through PYTHONPATH_SCIPY and the binaries with PATH_SCIPY.</readme>
-    </package>
+                    <action type="set_environment">
+                        <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                        <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                        <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
+                        <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
+                        <environment_variable action="set_to" name="PYTHONPATH_SCIPY">$INSTALL_DIR/lib/python</environment_variable>
+                        <environment_variable action="set_to" name="PATH_SCIPY">$INSTALL_DIR/bin</environment_variable>
+                        </action>
+                </actions>
+            </install>
+            <readme>Compiling scipy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for scipy can be accessed through PYTHONPATH_SCIPY and the binaries with PATH_SCIPY.</readme>
+        </package>
 </tool_dependency>