# HG changeset patch
# User iuc
# Date 1423155149 18000
# Node ID 8b7d6f6cb89bd56a6d4610da2c489fd5be93f4b0

Uploaded

diff -r 000000000000 -r 8b7d6f6cb89b tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Feb 05 11:52:29 2015 -0500
@@ -0,0 +1,24 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="seqtk" version="1.0-r75-dirty">
+        <install version="1.0">
+            <actions>
+                <action type="shell_command">git clone https://github.com/lh3/seqtk/ seqtk</action>
+                <action type="shell_command">git reset --hard 08b3625c2a7aae3eca9ab056e1adea52ec22cbef</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>seqtk</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                  <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+Seqtk is a fast and lightweight tool for processing sequences in the FASTA or
+FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be
+optionally compressed by gzip.
+        </readme>
+    </package>
+</tool_dependency>