Mercurial > repos > iuc > package_trinity_2_1_1
comparison tool_dependencies.xml @ 1:6bbb95b43f62 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_trinity_2_1_1 commit a7154599629e0f552495d91166648c3398acc10e
| author | iuc |
|---|---|
| date | Mon, 25 Apr 2016 11:43:03 -0400 |
| parents | b66b28a11557 |
| children | 26c668666989 |
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| 0:b66b28a11557 | 1:6bbb95b43f62 |
|---|---|
| 108 </package> | 108 </package> |
| 109 <package sha256sum="0f67391d3fd6bc970293b5eb11dcd14f15686b61bce1c6da03e16dc3a60e93f2"> | 109 <package sha256sum="0f67391d3fd6bc970293b5eb11dcd14f15686b61bce1c6da03e16dc3a60e93f2"> |
| 110 https://depot.galaxyproject.org/software/ctc/ctc_1.44.0_src_all.tar.gz | 110 https://depot.galaxyproject.org/software/ctc/ctc_1.44.0_src_all.tar.gz |
| 111 </package> | 111 </package> |
| 112 <package sha256sum="f16b6316fdbd7ab0077644d41a3286a688b0b75cc34686383e10f139f0955ae1"> | 112 <package sha256sum="f16b6316fdbd7ab0077644d41a3286a688b0b75cc34686383e10f139f0955ae1"> |
| 113 https://depot.galaxyproject.org/software/biobase/biobase_2.30.0_src_all.tar.gz | 113 https://depot.galaxyproject.org/software/Biobase/Biobase_2.30.0_src_all.tar.gz |
| 114 </package> | 114 </package> |
| 115 </action> | 115 </action> |
| 116 | 116 |
| 117 <action type="shell_command">sed -i.bak -e 's/-ltinfo//' trinity-plugins/Makefile</action> <!-- tinfo is included in ncurses lib--> | 117 <action type="shell_command">sed -i.bak -e 's/-ltinfo//' trinity-plugins/Makefile</action> <!-- tinfo is included in ncurses lib--> |
| 118 <action type="shell_command">sed -i.bak -e '/tar xvf samtools-0.1.19.tar.bz2/a \\tsed -i.bak -e "s|-lcurses|-lncurses|" samtools-0.1.19/Makefile samtools-0.1.19/Makefile' trinity-plugins/Makefile</action> <!-- ncurses instead of curses --> | 118 <action type="shell_command">sed -i.bak -e '/tar xvf samtools-0.1.19.tar.bz2/a \\tsed -i.bak -e "s|-lcurses|-lncurses|" samtools-0.1.19/Makefile samtools-0.1.19/Makefile' trinity-plugins/Makefile</action> <!-- ncurses instead of curses --> |