Mercurial > repos > iuc > package_vienna_rna_1_8

changeset 1:6757330f89cd draft default tip

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Uploaded
author iuc
date Tue, 03 Feb 2015 08:14:37 -0500
parents 54e961ee33d4
children
files tool_dependencies.xml
diffstat 1 files changed, 9 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Jan 27 09:02:04 2015 -0500
+++ b/tool_dependencies.xml	Tue Feb 03 08:14:37 2015 -0500
@@ -1,15 +1,15 @@
 <?xml version="1.0"?>
 <tool_dependency>
-  <package name="perl" version="5.18.1">
-      <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <package name="perl" version="5.18.1">
+        <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="vienna_rna" version="1.8.5">
-      <install version="1.0">
-          <actions>
-              <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-1.8.5.tar.gz</action>
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-1.8.5.tar.gz</action>
                 <action type="set_environment_for_install">
-                  <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
-                      <package name="perl" version="5.18.1" />
+                    <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="perl" version="5.18.1" />
                     </repository>
                 </action>
                 <action type="shell_command">./configure --prefix $INSTALL_DIR</action>
@@ -17,8 +17,9 @@
                 <action type="shell_command">perl Makefile.PL PREFIX=$INSTALL_DIR/perl</action>
                 <action type="change_directory">..</action>
                 <action type="make_install" />
+
                 <action type="set_environment">
-                  <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
+                    <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                     <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>