view tool_dependencies.xml @ 0:99c947b9fb31 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_vsearch_1_9_7 commit 29f6e6424a37947adbe1eba92f0e7d3c83efc042-dirty

<?xml version="1.0"?>
<tool_dependency>
    <package name="vsearch" version="1.9.7">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="darwin">
                    <action type="download_by_url" sha256sum="34f3facaeb4a17bb70efb375f41032b96d542d19726f58e7959b7d5a6f0c069b">
                        https://github.com/torognes/vsearch/releases/download/v1.9.7/vsearch-1.9.7-osx-x86_64.tar.gz
                    </action>
                    <action type="move_file">
                        <source>./bin/vsearch</source>
                        <destination>$INSTALL_DIR/bin</destination>
                    </action>
                    <action type="chmod">
                        <file mode="755">$INSTALL_DIR/bin/vsearch</file>
                    </action>
                </actions>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url" sha256sum="8bc31056fb9c6d53d74d7ef6c12d979a6cba60acd4bb8fcc883654143e9cf301">
                        https://github.com/torognes/vsearch/releases/download/v1.9.7/vsearch-1.9.7-linux-x86_64.tar.gz
                    </action>
                    <action type="move_file">
                        <source>./bin/vsearch</source>
                        <destination>$INSTALL_DIR/bin</destination>
                    </action>
                    <action type="chmod">
                        <file mode="755">$INSTALL_DIR/bin/vsearch</file>
                    </action>
                </actions>

                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>
        VSEARCH: Open and free 64-bit multithreaded tool for processing metagenomic sequences, including searching, clustering,
        chimera detection, dereplication, sorting, masking and shuffling.
        https://github.com/torognes/vsearch
        </readme>
    </package>
</tool_dependency>