Mercurial > repos > iuc > pairtools_dedup

view test-data/output_dedup_pairs.stats @ 3:5412142130ad draft

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planemo upload for repository https://github.com/open2c/pairtools commit edb9fd7a6734203070b623876e76ce4a0a164ed9
author iuc
date Tue, 16 Apr 2024 12:51:21 +0000
parents f8c1d2a93d43
children 55a53b5e308d
line wrap: on
line source

total	1992
total_unmapped	914
total_single_sided_mapped	287
total_mapped	791
total_dups	9
total_nodups	782
cis	597
trans	185
pair_types/NN	853
pair_types/UU	782
pair_types/NU	234
pair_types/MU	53
pair_types/MM	40
pair_types/NM	21
pair_types/DD	9
cis_1kb+	185
cis_2kb+	171
cis_4kb+	151
cis_10kb+	114
cis_20kb+	80
cis_40kb+	46
summary/frac_cis	0.7634271099744245
summary/frac_cis_1kb+	0.23657289002557544
summary/frac_cis_2kb+	0.2186700767263427
summary/frac_cis_4kb+	0.19309462915601022
summary/frac_cis_10kb+	0.14578005115089515
summary/frac_cis_20kb+	0.10230179028132992
summary/frac_cis_40kb+	0.058823529411764705
summary/frac_dups	0.011378002528445006
summary/complexity_naive	34495.88583157276
chrom_freq/chrIV/chrIV	83
chrom_freq/chrVII/chrVII	55
chrom_freq/chrXV/chrXV	53
chrom_freq/chrXIII/chrXIII	46
chrom_freq/chrII/chrII	41
chrom_freq/chrXVI/chrXVI	40
chrom_freq/chrXIV/chrXIV	37
chrom_freq/chrX/chrX	37
chrom_freq/chrXII/chrXII	36
chrom_freq/chrXI/chrXI	36
chrom_freq/chrM/chrM	33
chrom_freq/chrVIII/chrVIII	30
chrom_freq/chrIX/chrIX	22
chrom_freq/chrV/chrV	21
chrom_freq/chrIII/chrIII	12
chrom_freq/chrVI/chrVI	8
chrom_freq/chrI/chrI	7
chrom_freq/chrVII/chrXV	6
chrom_freq/chrIV/chrXII	6
chrom_freq/chrIV/chrXIII	6
chrom_freq/chrVII/chrXII	6
chrom_freq/chrII/chrVII	5
chrom_freq/chrXII/chrXIII	5
chrom_freq/chrIV/chrX	5
chrom_freq/chrX/chrXIV	4
chrom_freq/chrII/chrIV	4
chrom_freq/chrII/chrXVI	4
chrom_freq/chrXIV/chrXVI	4
chrom_freq/chrII/chrXIV	4
chrom_freq/chrVII/chrXIV	4
chrom_freq/chrXI/chrXV	4
chrom_freq/chrXI/chrXII	4
chrom_freq/chrIV/chrVII	4
chrom_freq/chrXIII/chrXV	3
chrom_freq/chrXI/chrXVI	3
chrom_freq/chrII/chrXIII	3
chrom_freq/chrXI/chrXIII	3
chrom_freq/chrVII/chrIX	3
chrom_freq/chrVIII/chrXIII	3
chrom_freq/chrX/chrXII	3
chrom_freq/chrX/chrXIII	3
chrom_freq/chrXIII/chrXIV	3
chrom_freq/chrV/chrXVI	3
chrom_freq/chrIV/chrV	3
chrom_freq/chrIV/chrVIII	3
chrom_freq/chrIV/chrXI	3
chrom_freq/chrIV/chrXV	3
chrom_freq/chrIV/chrXVI	3
chrom_freq/chrXV/chrXVI	3
chrom_freq/chrIX/chrXII	3
chrom_freq/chrXIII/chrXVI	2
chrom_freq/chrX/chrXVI	2
chrom_freq/chrIV/chrVI	2
chrom_freq/chrIV/chrXIV	2
chrom_freq/chrXI/chrXIV	2
chrom_freq/chrVII/chrXVI	2
chrom_freq/chrIX/chrX	2
chrom_freq/chrVII/chrVIII	2
chrom_freq/chrIII/chrX	2
chrom_freq/chrIX/chrXV	2
chrom_freq/chrIII/chrV	2
chrom_freq/chrXIV/chrXV	2
chrom_freq/chrXII/chrXV	2
chrom_freq/chrV/chrX	2
chrom_freq/chrI/chrX	2
chrom_freq/chrII/chrXV	2
chrom_freq/chrII/chrVIII	1
chrom_freq/chrXII/chrXIV	1
chrom_freq/chrXII/chrXVI	1
chrom_freq/chrII/chrX	1
chrom_freq/chrI/chrXV	1
chrom_freq/chrIII/chrXIII	1
chrom_freq/chrII/chrXI	1
chrom_freq/chrVI/chrX	1
chrom_freq/chrIII/chrVIII	1
chrom_freq/chrIX/chrXI	1
chrom_freq/chrV/chrM	1
chrom_freq/chrV/chrVI	1
chrom_freq/chrV/chrXI	1
chrom_freq/chrV/chrXIII	1
chrom_freq/chrV/chrXIV	1
chrom_freq/chrV/chrXV	1
chrom_freq/chrVI/chrXI	1
chrom_freq/chrVIII/chrXV	1
chrom_freq/chrVI/chrXII	1
chrom_freq/chrVI/chrXIII	1
chrom_freq/chrVI/chrXIV	1
chrom_freq/chrVI/chrXVI	1
chrom_freq/chrVII/chrXIII	1
chrom_freq/chrVIII/chrIX	1
chrom_freq/chrVIII/chrXI	1
chrom_freq/chrVIII/chrXII	1
chrom_freq/chrVI/chrVII	1
dist_freq/0-1/+-	0
dist_freq/0-1/-+	0
dist_freq/0-1/--	0
dist_freq/0-1/++	0
dist_freq/1-2/+-	0
dist_freq/1-2/-+	0
dist_freq/1-2/--	0
dist_freq/1-2/++	0
dist_freq/2-3/+-	0
dist_freq/2-3/-+	0
dist_freq/2-3/--	0
dist_freq/2-3/++	0
dist_freq/3-6/+-	0
dist_freq/3-6/-+	1
dist_freq/3-6/--	0
dist_freq/3-6/++	1
dist_freq/6-10/+-	0
dist_freq/6-10/-+	0
dist_freq/6-10/--	0
dist_freq/6-10/++	0
dist_freq/10-18/+-	0
dist_freq/10-18/-+	0
dist_freq/10-18/--	0
dist_freq/10-18/++	0
dist_freq/18-32/+-	0
dist_freq/18-32/-+	0
dist_freq/18-32/--	0
dist_freq/18-32/++	0
dist_freq/32-56/+-	0
dist_freq/32-56/-+	0
dist_freq/32-56/--	0
dist_freq/32-56/++	0
dist_freq/56-100/+-	0
dist_freq/56-100/-+	1
dist_freq/56-100/--	0
dist_freq/56-100/++	0
dist_freq/100-178/+-	7
dist_freq/100-178/-+	2
dist_freq/100-178/--	2
dist_freq/100-178/++	0
dist_freq/178-316/+-	334
dist_freq/178-316/-+	9
dist_freq/178-316/--	1
dist_freq/178-316/++	0
dist_freq/316-562/+-	34
dist_freq/316-562/-+	7
dist_freq/316-562/--	0
dist_freq/316-562/++	0
dist_freq/562-1000/+-	1
dist_freq/562-1000/-+	11
dist_freq/562-1000/--	0
dist_freq/562-1000/++	1
dist_freq/1000-1778/+-	0
dist_freq/1000-1778/-+	5
dist_freq/1000-1778/--	6
dist_freq/1000-1778/++	1
dist_freq/1778-3162/+-	5
dist_freq/1778-3162/-+	7
dist_freq/1778-3162/--	2
dist_freq/1778-3162/++	0
dist_freq/3162-5623/+-	4
dist_freq/3162-5623/-+	4
dist_freq/3162-5623/--	6
dist_freq/3162-5623/++	4
dist_freq/5623-10000/+-	9
dist_freq/5623-10000/-+	4
dist_freq/5623-10000/--	9
dist_freq/5623-10000/++	5
dist_freq/10000-17783/+-	7
dist_freq/10000-17783/-+	4
dist_freq/10000-17783/--	8
dist_freq/10000-17783/++	10
dist_freq/17783-31623/+-	9
dist_freq/17783-31623/-+	4
dist_freq/17783-31623/--	8
dist_freq/17783-31623/++	5
dist_freq/31623-56234/+-	6
dist_freq/31623-56234/-+	4
dist_freq/31623-56234/--	7
dist_freq/31623-56234/++	10
dist_freq/56234-100000/+-	2
dist_freq/56234-100000/-+	1
dist_freq/56234-100000/--	5
dist_freq/56234-100000/++	5
dist_freq/100000-177828/+-	3
dist_freq/100000-177828/-+	1
dist_freq/100000-177828/--	1
dist_freq/100000-177828/++	2
dist_freq/177828-316228/+-	3
dist_freq/177828-316228/-+	0
dist_freq/177828-316228/--	2
dist_freq/177828-316228/++	3
dist_freq/316228-562341/+-	0
dist_freq/316228-562341/-+	0
dist_freq/316228-562341/--	0
dist_freq/316228-562341/++	1
dist_freq/562341-1000000/+-	1
dist_freq/562341-1000000/-+	0
dist_freq/562341-1000000/--	0
dist_freq/562341-1000000/++	1
dist_freq/1000000-1778279/+-	0
dist_freq/1000000-1778279/-+	0
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dist_freq/5623413-10000000/-+	0
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