Mercurial > repos > iuc > pairtools_sort
comparison test-data/pairs_output_yaml.stats @ 3:d392cfd963f4 draft
planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
author | iuc |
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date | Fri, 05 Apr 2024 10:33:24 +0000 |
parents | |
children | 8ed44487c834 |
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2:0f35bc206bbb | 3:d392cfd963f4 |
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1 no_filter: | |
2 total: 592 | |
3 total_unmapped: 4 | |
4 total_single_sided_mapped: 147 | |
5 total_mapped: 441 | |
6 total_dups: 0 | |
7 total_nodups: 441 | |
8 cis: 441 | |
9 trans: 0 | |
10 pair_types: | |
11 UU: 405 | |
12 NR: 119 | |
13 MU: 21 | |
14 UR: 19 | |
15 RU: 17 | |
16 MR: 6 | |
17 MM: 4 | |
18 NU: 1 | |
19 cis_1kb+: 75 | |
20 cis_2kb+: 72 | |
21 cis_4kb+: 70 | |
22 cis_10kb+: 67 | |
23 cis_20kb+: 61 | |
24 cis_40kb+: 61 | |
25 summary: | |
26 frac_cis: 1.0 | |
27 frac_cis_1kb+: 0.17006802721088435 | |
28 frac_cis_2kb+: 0.16326530612244897 | |
29 frac_cis_4kb+: 0.15873015873015872 | |
30 frac_cis_10kb+: 0.15192743764172337 | |
31 frac_cis_20kb+: 0.1383219954648526 | |
32 frac_cis_40kb+: 0.1383219954648526 | |
33 frac_dups: 0.0 | |
34 complexity_naive: .nan | |
35 chrom_freq: | |
36 Test_seq/Test_seq: 441 | |
37 dist_freq: | |
38 +-: | |
39 0: 0 | |
40 1: 0 | |
41 2: 0 | |
42 3: 0 | |
43 6: 0 | |
44 10: 0 | |
45 18: 0 | |
46 32: 7 | |
47 56: 9 | |
48 100: 5 | |
49 178: 60 | |
50 316: 284 | |
51 562: 1 | |
52 1000: 1 | |
53 1778: 1 | |
54 3162: 0 | |
55 5623: 2 | |
56 10000: 2 | |
57 17783: 1 | |
58 31623: 0 | |
59 56234: 3 | |
60 100000: 3 | |
61 177828: 4 | |
62 316228: 0 | |
63 562341: 0 | |
64 1000000: 0 | |
65 1778279: 0 | |
66 3162278: 0 | |
67 5623413: 0 | |
68 10000000: 0 | |
69 17782794: 0 | |
70 31622777: 0 | |
71 56234133: 0 | |
72 100000000: 0 | |
73 177827941: 0 | |
74 316227766: 0 | |
75 562341325: 0 | |
76 1000000000: 0 | |
77 -+: | |
78 0: 0 | |
79 1: 0 | |
80 2: 0 | |
81 3: 0 | |
82 6: 0 | |
83 10: 0 | |
84 18: 0 | |
85 32: 0 | |
86 56: 0 | |
87 100: 0 | |
88 178: 0 | |
89 316: 0 | |
90 562: 0 | |
91 1000: 0 | |
92 1778: 0 | |
93 3162: 0 | |
94 5623: 0 | |
95 10000: 2 | |
96 17783: 0 | |
97 31623: 1 | |
98 56234: 0 | |
99 100000: 3 | |
100 177828: 0 | |
101 316228: 1 | |
102 562341: 0 | |
103 1000000: 0 | |
104 1778279: 0 | |
105 3162278: 0 | |
106 5623413: 0 | |
107 10000000: 0 | |
108 17782794: 0 | |
109 31622777: 0 | |
110 56234133: 0 | |
111 100000000: 0 | |
112 177827941: 0 | |
113 316227766: 0 | |
114 562341325: 0 | |
115 1000000000: 0 | |
116 --: | |
117 0: 0 | |
118 1: 0 | |
119 2: 0 | |
120 3: 0 | |
121 6: 0 | |
122 10: 0 | |
123 18: 0 | |
124 32: 0 | |
125 56: 0 | |
126 100: 0 | |
127 178: 0 | |
128 316: 0 | |
129 562: 0 | |
130 1000: 1 | |
131 1778: 1 | |
132 3162: 0 | |
133 5623: 0 | |
134 10000: 0 | |
135 17783: 0 | |
136 31623: 21 | |
137 56234: 1 | |
138 100000: 2 | |
139 177828: 0 | |
140 316228: 0 | |
141 562341: 0 | |
142 1000000: 0 | |
143 1778279: 0 | |
144 3162278: 0 | |
145 5623413: 0 | |
146 10000000: 0 | |
147 17782794: 0 | |
148 31622777: 0 | |
149 56234133: 0 | |
150 100000000: 0 | |
151 177827941: 0 | |
152 316227766: 0 | |
153 562341325: 0 | |
154 1000000000: 0 | |
155 ++: | |
156 0: 0 | |
157 1: 0 | |
158 2: 0 | |
159 3: 0 | |
160 6: 0 | |
161 10: 0 | |
162 18: 0 | |
163 32: 0 | |
164 56: 0 | |
165 100: 0 | |
166 178: 0 | |
167 316: 0 | |
168 562: 0 | |
169 1000: 0 | |
170 1778: 1 | |
171 3162: 0 | |
172 5623: 1 | |
173 10000: 1 | |
174 17783: 0 | |
175 31623: 10 | |
176 56234: 3 | |
177 100000: 7 | |
178 177828: 2 | |
179 316228: 0 | |
180 562341: 0 | |
181 1000000: 0 | |
182 1778279: 0 | |
183 3162278: 0 | |
184 5623413: 0 | |
185 10000000: 0 | |
186 17782794: 0 | |
187 31622777: 0 | |
188 56234133: 0 | |
189 100000000: 0 | |
190 177827941: 0 | |
191 316227766: 0 | |
192 562341325: 0 | |
193 1000000000: 0 | |
194 chromsizes: | |
195 Test_seq: 450060 |