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view test-data/pairs_output_merged.stats @ 3:060f0fed864e draft

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planemo upload for repository https://github.com/open2c/pairtools commit 162c595b19e442f40be4c2f5434b20b56ade52d4
author iuc
date Tue, 30 Apr 2024 12:02:15 +0000
parents 2c87e49a6407
children
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total	1184
total_unmapped	8
total_single_sided_mapped	294
total_mapped	882
total_dups	0
total_nodups	882
cis	882
trans	0
pair_types/NU	2
pair_types/RU	34
pair_types/MR	12
pair_types/UU	810
pair_types/NR	238
pair_types/MU	42
pair_types/MM	8
pair_types/UR	38
cis_1kb+	150
cis_2kb+	144
cis_4kb+	140
cis_10kb+	134
cis_20kb+	122
cis_40kb+	122
summary/frac_cis	1.0
summary/frac_cis_1kb+	0.17006802721088435
summary/frac_cis_2kb+	0.16326530612244897
summary/frac_cis_4kb+	0.15873015873015872
summary/frac_cis_10kb+	0.15192743764172337
summary/frac_cis_20kb+	0.1383219954648526
summary/frac_cis_40kb+	0.1383219954648526
summary/frac_dups	0.0
summary/complexity_naive	nan
summary/dist_freq_convergence/convergence_dist	421697
summary/dist_freq_convergence/strands_w_max_convergence_dist	++
summary/dist_freq_convergence/convergence_rel_diff_threshold	0.05
summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/++	50
summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/--	52
summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-+	14
summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/+-	766
summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist_all_strands	882
summary/dist_freq_convergence/n_cis_pairs_above_convergence_dist_all_strands	0
summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/++	0.05668934240362812
summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/--	0.05895691609977324
summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-+	0.015873015873015872
summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/+-	0.8684807256235828
summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist_all_strands	1.0
summary/dist_freq_convergence/frac_cis_in_cis_above_convergence_dist_all_strands	0.0
summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/++	0.05668934240362812
summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/--	0.05895691609977324
summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-+	0.015873015873015872
summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/+-	0.8684807256235828
summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist_all_strands	1.0
summary/dist_freq_convergence/frac_total_mapped_in_cis_above_convergence_dist_all_strands	0.0
summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/++	0.05668934240362812
summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/--	0.05895691609977324
summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-+	0.015873015873015872
summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/+-	0.8684807256235828
summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist_all_strands	1.0
summary/dist_freq_convergence/frac_total_nodups_in_cis_above_convergence_dist_all_strands	0.0
chrom_freq/Test_seq/Test_seq	882
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chromsizes/Test_seq	450060