Mercurial > repos > iuc > pairtools_stats

comparison test-data/output_dedup_pairs.stats @ 2:6cbca5661205 draft

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planemo upload for repository https://github.com/open2c/pairtools commit 162c595b19e442f40be4c2f5434b20b56ade52d4
author iuc
date Tue, 30 Apr 2024 12:02:01 +0000
parents 3c87fa1a3b50
children
comparison
equal deleted inserted replaced
1:81fc1418fbfb 2:6cbca5661205
26 summary/frac_cis_10kb+ 0.14578005115089515 26 summary/frac_cis_10kb+ 0.14578005115089515
27 summary/frac_cis_20kb+ 0.10230179028132992 27 summary/frac_cis_20kb+ 0.10230179028132992
28 summary/frac_cis_40kb+ 0.058823529411764705 28 summary/frac_cis_40kb+ 0.058823529411764705
29 summary/frac_dups 0.011378002528445006 29 summary/frac_dups 0.011378002528445006
30 summary/complexity_naive 34495.88583157276 30 summary/complexity_naive 34495.88583157276
31 summary/dist_freq_convergence/convergence_dist 1333521
32 summary/dist_freq_convergence/strands_w_max_convergence_dist ++
33 summary/dist_freq_convergence/convergence_rel_diff_threshold 0.05
34 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/++ 49
35 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-- 58
36 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-+ 65
37 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/+- 425
38 summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist_all_strands 597
39 summary/dist_freq_convergence/n_cis_pairs_above_convergence_dist_all_strands 0
40 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/++ 0.08207705192629816
41 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-- 0.09715242881072027
42 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-+ 0.10887772194304858
43 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/+- 0.711892797319933
44 summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist_all_strands 1.0
45 summary/dist_freq_convergence/frac_cis_in_cis_above_convergence_dist_all_strands 0.0
46 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/++ 0.061946902654867256
47 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-- 0.07332490518331226
48 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-+ 0.08217446270543616
49 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/+- 0.5372945638432364
50 summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist_all_strands 0.754740834386852
51 summary/dist_freq_convergence/frac_total_mapped_in_cis_above_convergence_dist_all_strands 0.0
52 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/++ 0.06265984654731457
53 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-- 0.0741687979539642
54 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-+ 0.08312020460358056
55 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/+- 0.5434782608695652
56 summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist_all_strands 0.7634271099744245
57 summary/dist_freq_convergence/frac_total_nodups_in_cis_above_convergence_dist_all_strands 0.0
31 chrom_freq/chrIV/chrIV 83 58 chrom_freq/chrIV/chrIV 83
32 chrom_freq/chrVII/chrVII 55 59 chrom_freq/chrVII/chrVII 55
33 chrom_freq/chrXV/chrXV 53 60 chrom_freq/chrXV/chrXV 53
34 chrom_freq/chrXIII/chrXIII 46 61 chrom_freq/chrXIII/chrXIII 46
35 chrom_freq/chrII/chrII 41 62 chrom_freq/chrII/chrII 41
131 dist_freq/1-2/++ 0 158 dist_freq/1-2/++ 0
132 dist_freq/2-3/+- 0 159 dist_freq/2-3/+- 0
133 dist_freq/2-3/-+ 0 160 dist_freq/2-3/-+ 0
134 dist_freq/2-3/-- 0 161 dist_freq/2-3/-- 0
135 dist_freq/2-3/++ 0 162 dist_freq/2-3/++ 0
136 dist_freq/3-6/+- 0 163 dist_freq/3-4/+- 0
137 dist_freq/3-6/-+ 1 164 dist_freq/3-4/-+ 0
138 dist_freq/3-6/-- 0 165 dist_freq/3-4/-- 0
139 dist_freq/3-6/++ 1 166 dist_freq/3-4/++ 0
140 dist_freq/6-10/+- 0 167 dist_freq/4-6/+- 0
141 dist_freq/6-10/-+ 0 168 dist_freq/4-6/-+ 1
142 dist_freq/6-10/-- 0 169 dist_freq/4-6/-- 0
143 dist_freq/6-10/++ 0 170 dist_freq/4-6/++ 1
144 dist_freq/10-18/+- 0 171 dist_freq/6-7/+- 0
145 dist_freq/10-18/-+ 0 172 dist_freq/6-7/-+ 0
146 dist_freq/10-18/-- 0 173 dist_freq/6-7/-- 0
147 dist_freq/10-18/++ 0 174 dist_freq/6-7/++ 0
148 dist_freq/18-32/+- 0 175 dist_freq/7-10/+- 0
149 dist_freq/18-32/-+ 0 176 dist_freq/7-10/-+ 0
150 dist_freq/18-32/-- 0 177 dist_freq/7-10/-- 0
151 dist_freq/18-32/++ 0 178 dist_freq/7-10/++ 0
152 dist_freq/32-56/+- 0 179 dist_freq/10-13/+- 0
153 dist_freq/32-56/-+ 0 180 dist_freq/10-13/-+ 0
154 dist_freq/32-56/-- 0 181 dist_freq/10-13/-- 0
155 dist_freq/32-56/++ 0 182 dist_freq/10-13/++ 0
156 dist_freq/56-100/+- 0 183 dist_freq/13-18/+- 0
157 dist_freq/56-100/-+ 1 184 dist_freq/13-18/-+ 0
158 dist_freq/56-100/-- 0 185 dist_freq/13-18/-- 0
159 dist_freq/56-100/++ 0 186 dist_freq/13-18/++ 0
160 dist_freq/100-178/+- 7 187 dist_freq/18-24/+- 0
161 dist_freq/100-178/-+ 2 188 dist_freq/18-24/-+ 0
162 dist_freq/100-178/-- 2 189 dist_freq/18-24/-- 0
163 dist_freq/100-178/++ 0 190 dist_freq/18-24/++ 0
164 dist_freq/178-316/+- 334 191 dist_freq/24-32/+- 0
165 dist_freq/178-316/-+ 9 192 dist_freq/24-32/-+ 0
166 dist_freq/178-316/-- 1 193 dist_freq/24-32/-- 0
167 dist_freq/178-316/++ 0 194 dist_freq/24-32/++ 0
168 dist_freq/316-562/+- 34 195 dist_freq/32-42/+- 0
169 dist_freq/316-562/-+ 7 196 dist_freq/32-42/-+ 0
170 dist_freq/316-562/-- 0 197 dist_freq/32-42/-- 0
171 dist_freq/316-562/++ 0 198 dist_freq/32-42/++ 0
172 dist_freq/562-1000/+- 1 199 dist_freq/42-56/+- 0
173 dist_freq/562-1000/-+ 11 200 dist_freq/42-56/-+ 0
174 dist_freq/562-1000/-- 0 201 dist_freq/42-56/-- 0
175 dist_freq/562-1000/++ 1 202 dist_freq/42-56/++ 0
176 dist_freq/1000-1778/+- 0 203 dist_freq/56-75/+- 0
177 dist_freq/1000-1778/-+ 5 204 dist_freq/56-75/-+ 0
178 dist_freq/1000-1778/-- 6 205 dist_freq/56-75/-- 0
179 dist_freq/1000-1778/++ 1 206 dist_freq/56-75/++ 0
180 dist_freq/1778-3162/+- 5 207 dist_freq/75-100/+- 0
181 dist_freq/1778-3162/-+ 7 208 dist_freq/75-100/-+ 1
182 dist_freq/1778-3162/-- 2 209 dist_freq/75-100/-- 0
183 dist_freq/1778-3162/++ 0 210 dist_freq/75-100/++ 0
184 dist_freq/3162-5623/+- 4 211 dist_freq/100-133/+- 1
185 dist_freq/3162-5623/-+ 4 212 dist_freq/100-133/-+ 0
186 dist_freq/3162-5623/-- 6 213 dist_freq/100-133/-- 1
187 dist_freq/3162-5623/++ 4 214 dist_freq/100-133/++ 0
188 dist_freq/5623-10000/+- 9 215 dist_freq/133-178/+- 6
189 dist_freq/5623-10000/-+ 4 216 dist_freq/133-178/-+ 2
190 dist_freq/5623-10000/-- 9 217 dist_freq/133-178/-- 1
191 dist_freq/5623-10000/++ 5 218 dist_freq/133-178/++ 0
192 dist_freq/10000-17783/+- 7 219 dist_freq/178-237/+- 116
193 dist_freq/10000-17783/-+ 4 220 dist_freq/178-237/-+ 3
194 dist_freq/10000-17783/-- 8 221 dist_freq/178-237/-- 0
195 dist_freq/10000-17783/++ 10 222 dist_freq/178-237/++ 0
196 dist_freq/17783-31623/+- 9 223 dist_freq/237-316/+- 218
197 dist_freq/17783-31623/-+ 4 224 dist_freq/237-316/-+ 6
198 dist_freq/17783-31623/-- 8 225 dist_freq/237-316/-- 1
199 dist_freq/17783-31623/++ 5 226 dist_freq/237-316/++ 0
200 dist_freq/31623-56234/+- 6 227 dist_freq/316-422/+- 32
201 dist_freq/31623-56234/-+ 4 228 dist_freq/316-422/-+ 3
202 dist_freq/31623-56234/-- 7 229 dist_freq/316-422/-- 0
203 dist_freq/31623-56234/++ 10 230 dist_freq/316-422/++ 0
204 dist_freq/56234-100000/+- 2 231 dist_freq/422-562/+- 2
205 dist_freq/56234-100000/-+ 1 232 dist_freq/422-562/-+ 4
206 dist_freq/56234-100000/-- 5 233 dist_freq/422-562/-- 0
207 dist_freq/56234-100000/++ 5 234 dist_freq/422-562/++ 0
208 dist_freq/100000-177828/+- 3 235 dist_freq/562-750/+- 1
209 dist_freq/100000-177828/-+ 1 236 dist_freq/562-750/-+ 3
210 dist_freq/100000-177828/-- 1 237 dist_freq/562-750/-- 0
211 dist_freq/100000-177828/++ 2 238 dist_freq/562-750/++ 0
212 dist_freq/177828-316228/+- 3 239 dist_freq/750-1000/+- 0
213 dist_freq/177828-316228/-+ 0 240 dist_freq/750-1000/-+ 8
214 dist_freq/177828-316228/-- 2 241 dist_freq/750-1000/-- 0
215 dist_freq/177828-316228/++ 3 242 dist_freq/750-1000/++ 1
216 dist_freq/316228-562341/+- 0 243 dist_freq/1000-1334/+- 0
217 dist_freq/316228-562341/-+ 0 244 dist_freq/1000-1334/-+ 1
218 dist_freq/316228-562341/-- 0 245 dist_freq/1000-1334/-- 2
219 dist_freq/316228-562341/++ 1 246 dist_freq/1000-1334/++ 0
220 dist_freq/562341-1000000/+- 1 247 dist_freq/1334-1778/+- 0
221 dist_freq/562341-1000000/-+ 0 248 dist_freq/1334-1778/-+ 4
222 dist_freq/562341-1000000/-- 0 249 dist_freq/1334-1778/-- 4
223 dist_freq/562341-1000000/++ 1 250 dist_freq/1334-1778/++ 1
224 dist_freq/1000000-1778279/+- 0 251 dist_freq/1778-2371/+- 1
225 dist_freq/1000000-1778279/-+ 0 252 dist_freq/1778-2371/-+ 4
226 dist_freq/1000000-1778279/-- 1 253 dist_freq/1778-2371/-- 1
227 dist_freq/1000000-1778279/++ 0 254 dist_freq/1778-2371/++ 0
228 dist_freq/1778279-3162278/+- 0 255 dist_freq/2371-3162/+- 4
229 dist_freq/1778279-3162278/-+ 0 256 dist_freq/2371-3162/-+ 3
230 dist_freq/1778279-3162278/-- 0 257 dist_freq/2371-3162/-- 1
231 dist_freq/1778279-3162278/++ 0 258 dist_freq/2371-3162/++ 0
232 dist_freq/3162278-5623413/+- 0 259 dist_freq/3162-4217/+- 1
233 dist_freq/3162278-5623413/-+ 0 260 dist_freq/3162-4217/-+ 2
234 dist_freq/3162278-5623413/-- 0 261 dist_freq/3162-4217/-- 3
235 dist_freq/3162278-5623413/++ 0 262 dist_freq/3162-4217/++ 3
236 dist_freq/5623413-10000000/+- 0 263 dist_freq/4217-5623/+- 3
237 dist_freq/5623413-10000000/-+ 0 264 dist_freq/4217-5623/-+ 2
238 dist_freq/5623413-10000000/-- 0 265 dist_freq/4217-5623/-- 3
239 dist_freq/5623413-10000000/++ 0 266 dist_freq/4217-5623/++ 1
240 dist_freq/10000000-17782794/+- 0 267 dist_freq/5623-7499/+- 6
241 dist_freq/10000000-17782794/-+ 0 268 dist_freq/5623-7499/-+ 2
242 dist_freq/10000000-17782794/-- 0 269 dist_freq/5623-7499/-- 6
243 dist_freq/10000000-17782794/++ 0 270 dist_freq/5623-7499/++ 2
244 dist_freq/17782794-31622777/+- 0 271 dist_freq/7499-10000/+- 3
245 dist_freq/17782794-31622777/-+ 0 272 dist_freq/7499-10000/-+ 2
246 dist_freq/17782794-31622777/-- 0 273 dist_freq/7499-10000/-- 3
247 dist_freq/17782794-31622777/++ 0 274 dist_freq/7499-10000/++ 3
248 dist_freq/31622777-56234133/+- 0 275 dist_freq/10000-13335/+- 5
249 dist_freq/31622777-56234133/-+ 0 276 dist_freq/10000-13335/-+ 1
250 dist_freq/31622777-56234133/-- 0 277 dist_freq/10000-13335/-- 3
251 dist_freq/31622777-56234133/++ 0 278 dist_freq/10000-13335/++ 6
252 dist_freq/56234133-100000000/+- 0 279 dist_freq/13335-17783/+- 2
253 dist_freq/56234133-100000000/-+ 0 280 dist_freq/13335-17783/-+ 3
254 dist_freq/56234133-100000000/-- 0 281 dist_freq/13335-17783/-- 5
255 dist_freq/56234133-100000000/++ 0 282 dist_freq/13335-17783/++ 4
256 dist_freq/100000000-177827941/+- 0 283 dist_freq/17783-23714/+- 5
257 dist_freq/100000000-177827941/-+ 0 284 dist_freq/17783-23714/-+ 0
258 dist_freq/100000000-177827941/-- 0 285 dist_freq/17783-23714/-- 4
259 dist_freq/100000000-177827941/++ 0 286 dist_freq/17783-23714/++ 4
260 dist_freq/177827941-316227766/+- 0 287 dist_freq/23714-31623/+- 4
261 dist_freq/177827941-316227766/-+ 0 288 dist_freq/23714-31623/-+ 4
262 dist_freq/177827941-316227766/-- 0 289 dist_freq/23714-31623/-- 4
263 dist_freq/177827941-316227766/++ 0 290 dist_freq/23714-31623/++ 1
264 dist_freq/316227766-562341325/+- 0 291 dist_freq/31623-42170/+- 4
265 dist_freq/316227766-562341325/-+ 0 292 dist_freq/31623-42170/-+ 2
266 dist_freq/316227766-562341325/-- 0 293 dist_freq/31623-42170/-- 3
267 dist_freq/316227766-562341325/++ 0 294 dist_freq/31623-42170/++ 6
268 dist_freq/562341325-1000000000/+- 0 295 dist_freq/42170-56234/+- 2
269 dist_freq/562341325-1000000000/-+ 0 296 dist_freq/42170-56234/-+ 2
270 dist_freq/562341325-1000000000/-- 0 297 dist_freq/42170-56234/-- 4
271 dist_freq/562341325-1000000000/++ 0 298 dist_freq/42170-56234/++ 4
272 dist_freq/562341325+/+- 0 299 dist_freq/56234-74989/+- 2
273 dist_freq/562341325+/-+ 0 300 dist_freq/56234-74989/-+ 0
274 dist_freq/562341325+/-- 0 301 dist_freq/56234-74989/-- 4
275 dist_freq/562341325+/++ 0 302 dist_freq/56234-74989/++ 2
303 dist_freq/74989-100000/+- 0
304 dist_freq/74989-100000/-+ 1
305 dist_freq/74989-100000/-- 1
306 dist_freq/74989-100000/++ 3
307 dist_freq/100000-133352/+- 1
308 dist_freq/100000-133352/-+ 0
309 dist_freq/100000-133352/-- 0
310 dist_freq/100000-133352/++ 2
311 dist_freq/133352-177828/+- 2
312 dist_freq/133352-177828/-+ 1
313 dist_freq/133352-177828/-- 1
314 dist_freq/133352-177828/++ 0
315 dist_freq/177828-237137/+- 2
316 dist_freq/177828-237137/-+ 0
317 dist_freq/177828-237137/-- 2
318 dist_freq/177828-237137/++ 2
319 dist_freq/237137-316228/+- 1
320 dist_freq/237137-316228/-+ 0
321 dist_freq/237137-316228/-- 0
322 dist_freq/237137-316228/++ 1
323 dist_freq/316228-421697/+- 0
324 dist_freq/316228-421697/-+ 0
325 dist_freq/316228-421697/-- 0
326 dist_freq/316228-421697/++ 0
327 dist_freq/421697-562341/+- 0
328 dist_freq/421697-562341/-+ 0
329 dist_freq/421697-562341/-- 0
330 dist_freq/421697-562341/++ 1
331 dist_freq/562341-749894/+- 1
332 dist_freq/562341-749894/-+ 0
333 dist_freq/562341-749894/-- 0
334 dist_freq/562341-749894/++ 1
335 dist_freq/749894-1000000/+- 0
336 dist_freq/749894-1000000/-+ 0
337 dist_freq/749894-1000000/-- 0
338 dist_freq/749894-1000000/++ 0
339 dist_freq/1000000-1333521/+- 0
340 dist_freq/1000000-1333521/-+ 0
341 dist_freq/1000000-1333521/-- 1
342 dist_freq/1000000-1333521/++ 0
343 dist_freq/1333521-1778279/+- 0
344 dist_freq/1333521-1778279/-+ 0
345 dist_freq/1333521-1778279/-- 0
346 dist_freq/1333521-1778279/++ 0
347 dist_freq/1778279-2371374/+- 0
348 dist_freq/1778279-2371374/-+ 0
349 dist_freq/1778279-2371374/-- 0
350 dist_freq/1778279-2371374/++ 0
351 dist_freq/2371374-3162278/+- 0
352 dist_freq/2371374-3162278/-+ 0
353 dist_freq/2371374-3162278/-- 0
354 dist_freq/2371374-3162278/++ 0
355 dist_freq/3162278-4216965/+- 0
356 dist_freq/3162278-4216965/-+ 0
357 dist_freq/3162278-4216965/-- 0
358 dist_freq/3162278-4216965/++ 0
359 dist_freq/4216965-5623413/+- 0
360 dist_freq/4216965-5623413/-+ 0
361 dist_freq/4216965-5623413/-- 0
362 dist_freq/4216965-5623413/++ 0
363 dist_freq/5623413-7498942/+- 0
364 dist_freq/5623413-7498942/-+ 0
365 dist_freq/5623413-7498942/-- 0
366 dist_freq/5623413-7498942/++ 0
367 dist_freq/7498942-10000000/+- 0
368 dist_freq/7498942-10000000/-+ 0
369 dist_freq/7498942-10000000/-- 0
370 dist_freq/7498942-10000000/++ 0
371 dist_freq/10000000-13335214/+- 0
372 dist_freq/10000000-13335214/-+ 0
373 dist_freq/10000000-13335214/-- 0
374 dist_freq/10000000-13335214/++ 0
375 dist_freq/13335214-17782794/+- 0
376 dist_freq/13335214-17782794/-+ 0
377 dist_freq/13335214-17782794/-- 0
378 dist_freq/13335214-17782794/++ 0
379 dist_freq/17782794-23713737/+- 0
380 dist_freq/17782794-23713737/-+ 0
381 dist_freq/17782794-23713737/-- 0
382 dist_freq/17782794-23713737/++ 0
383 dist_freq/23713737-31622777/+- 0
384 dist_freq/23713737-31622777/-+ 0
385 dist_freq/23713737-31622777/-- 0
386 dist_freq/23713737-31622777/++ 0
387 dist_freq/31622777-42169650/+- 0
388 dist_freq/31622777-42169650/-+ 0
389 dist_freq/31622777-42169650/-- 0
390 dist_freq/31622777-42169650/++ 0
391 dist_freq/42169650-56234133/+- 0
392 dist_freq/42169650-56234133/-+ 0
393 dist_freq/42169650-56234133/-- 0
394 dist_freq/42169650-56234133/++ 0
395 dist_freq/56234133-74989421/+- 0
396 dist_freq/56234133-74989421/-+ 0
397 dist_freq/56234133-74989421/-- 0
398 dist_freq/56234133-74989421/++ 0
399 dist_freq/74989421-100000000/+- 0
400 dist_freq/74989421-100000000/-+ 0
401 dist_freq/74989421-100000000/-- 0
402 dist_freq/74989421-100000000/++ 0
403 dist_freq/100000000-133352143/+- 0
404 dist_freq/100000000-133352143/-+ 0
405 dist_freq/100000000-133352143/-- 0
406 dist_freq/100000000-133352143/++ 0
407 dist_freq/133352143-177827941/+- 0
408 dist_freq/133352143-177827941/-+ 0
409 dist_freq/133352143-177827941/-- 0
410 dist_freq/133352143-177827941/++ 0
411 dist_freq/177827941-237137371/+- 0
412 dist_freq/177827941-237137371/-+ 0
413 dist_freq/177827941-237137371/-- 0
414 dist_freq/177827941-237137371/++ 0
415 dist_freq/237137371-316227766/+- 0
416 dist_freq/237137371-316227766/-+ 0
417 dist_freq/237137371-316227766/-- 0
418 dist_freq/237137371-316227766/++ 0
419 dist_freq/316227766-421696503/+- 0
420 dist_freq/316227766-421696503/-+ 0
421 dist_freq/316227766-421696503/-- 0
422 dist_freq/316227766-421696503/++ 0
423 dist_freq/421696503-562341325/+- 0
424 dist_freq/421696503-562341325/-+ 0
425 dist_freq/421696503-562341325/-- 0
426 dist_freq/421696503-562341325/++ 0
427 dist_freq/562341325-749894209/+- 0
428 dist_freq/562341325-749894209/-+ 0
429 dist_freq/562341325-749894209/-- 0
430 dist_freq/562341325-749894209/++ 0
431 dist_freq/749894209-1000000000/+- 0
432 dist_freq/749894209-1000000000/-+ 0
433 dist_freq/749894209-1000000000/-- 0
434 dist_freq/749894209-1000000000/++ 0
435 dist_freq/1000000000+/+- 0
436 dist_freq/1000000000+/-+ 0
437 dist_freq/1000000000+/-- 0
438 dist_freq/1000000000+/++ 0