comparison pangolin.xml @ 14:83a69484cb87 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pangolin commit 402a11a20ec3f724dfe0b1a4bc60d806e77c1b3d"

13:debfccc4d65b

            <conditional name="db">
                <param name="source" value="download" />
            </conditional>
            <output name="output1" ftype="tabular">
                <assert_contents>
                    <has_text_matching expression="B\.1\.1\t0\.0" />
                    <has_text text="passed_qc" />
                    <has_n_lines n="1" />
                </assert_contents>
            </output>
        </test>

            <conditional name="db">
                <param name="source" value="download" />
            </conditional>
            <output name="output1" ftype="tabular">
                <assert_contents>
                    <has_text_matching expression="B\.1\.1.*\t0\.0\t*PUSHER" />
                    <has_text text="passed_qc" />
                    <has_n_lines n="1" />
                </assert_contents>
            </output>
        </test>

            <conditional name="db">
                <param name="source" value="download" />
            </conditional>
            <output name="output1" ftype="tabular">
                <assert_contents>
                    <has_text_matching expression="B\.1\.1\t0\.0" />
                    <has_text text="passed_qc" />
                    <has_n_lines n="1" />
                </assert_contents>
            </output>
            <output name="align1" file="aln1.fasta" ftype="fasta">

14:83a69484cb87

            <conditional name="db">
                <param name="source" value="download" />
            </conditional>
            <output name="output1" ftype="tabular">
                <assert_contents>
                    <has_text_matching expression="B\.1\.1\t\d\.\d" />
                    <has_text text="passed_qc" />
                    <has_n_lines n="1" />
                </assert_contents>
            </output>
        </test>

            <conditional name="db">
                <param name="source" value="download" />
            </conditional>
            <output name="output1" ftype="tabular">
                <assert_contents>
                    <has_text_matching expression="B\.1\.1.*\t\d\.\d\t*PUSHER" />
                    <has_text text="passed_qc" />
                    <has_n_lines n="1" />
                </assert_contents>
            </output>
        </test>

            <conditional name="db">
                <param name="source" value="download" />
            </conditional>
            <output name="output1" ftype="tabular">
                <assert_contents>
                    <has_text_matching expression="B\.1\.1\t\d\.\d" />
                    <has_text text="passed_qc" />
                    <has_n_lines n="1" />
                </assert_contents>
            </output>
            <output name="align1" file="aln1.fasta" ftype="fasta">